RNA–Protein interactions for RNA: ENST00000573584.5

NUP88-207, Transcript of nucleoporin 88, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NUP88, Length 2,916 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-207ENST00000573584 DUSP11O75319 330 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 PRLP01236 227 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 CNPP09543 421 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 MEP1AQ16819 746 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 C6orf141Q5SZD1 244 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 ZNF555Q8NEP9 628 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 RAD21L1Q9H4I0 556 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 GORASP2Q9H8Y8 452 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 DNAJB9Q9UBS3 223 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 UBA2Q9UBT2 640 aaPredicted RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 PDE10AQ9Y233 779 aa15.41■□□□□ 0.06
NUP88-207ENST00000573584 TDRD15B5MCY1 1934 aaKnown RBP15.41■□□□□ 0.06
NUP88-207ENST00000573584 IQCF5A8MTL0 148 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 CFAP99D6REC4 459 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 GNGT2O14610 69 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 FUCA1P04066 466 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 RELAQ04206 551 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ABRAXAS2Q15018 415 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 FRA10AC1Q70Z53 315 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 HS3ST5Q8IZT8 346 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 OR4F6Q8NGB9 312 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 OR10A6Q8NH74 314 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 CHPT1Q8WUD6 406 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 KCNJ9Q92806 393 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 CCDC138Q96M89 665 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 RDH12Q96NR8 316 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 IL37Q9NZH6 218 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 SELENONQ9NZV5 590 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ADGRE2Q9UHX3 823 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 PRG3Q9Y2Y8 225 aaPredicted RBP15.4■□□□□ 0.06
NUP88-207ENST00000573584 ARIH1Q9Y4X5 557 aaPredicted RBP15.4■□□□□ 0.06
NUP88-207ENST00000573584 COMMD10Q9Y6G5 202 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 KCNQ1P51787 676 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 MLLT10P55197 1068 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 PHEXP78562 749 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ITGADQ13349 1161 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 LAPTM5Q13571 262 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 GOLGA7Q7Z5G4 137 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 EFHBQ8N7U6 833 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 CHDHQ8NE62 594 aaPredicted RBP15.4■□□□□ 0.06
NUP88-207ENST00000573584 TTC16Q8NEE8 873 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 CCDC115Q96NT0 180 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 OSBPL10Q9BXB5 764 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 AMBRA1Q9C0C7 1298 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 CCSER2Q9H7U1 834 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 NUDT4Q9NZJ9 180 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ZMYM5Q9UJ78 669 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 SLC27A5Q9Y2P5 690 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 PCDHGC4Q9Y5F7 938 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ANKRD36A6QL64 1941 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 FAM92AA1XBS5 289 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 SOBPA7XYQ1 873 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 OR7A17O14581 309 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 SLC2A4P14672 509 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 JAK1P23458 1154 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 PIGAP37287 484 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 OR1G1P47890 313 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ARPP19P56211 112 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 PIGFQ07326 219 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 EPS8Q12929 822 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 NKG7Q16617 165 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 RGS21Q2M5E4 152 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 TAS2R42Q7RTR8 314 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 NECAB2Q7Z6G3 386 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 MBOAT4Q96T53 435 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 TDRD1Q9BXT4 1180 aaKnown RBP15.4■□□□□ 0.06
NUP88-207ENST00000573584 DGCR6LQ9BY27 220 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 MAGEH1Q9H213 219 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 SCUBE2Q9NQ36 999 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 NIPSNAP3AQ9UFN0 247 aaPredicted RBP15.4■□□□□ 0.06
NUP88-207ENST00000573584 NEUROG3Q9Y4Z2 214 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 ST14Q9Y5Y6 855 aa15.4■□□□□ 0.06
NUP88-207ENST00000573584 STX7O15400 261 aaKnown RBP15.39■□□□□ 0.05
NUP88-207ENST00000573584 SULT1C4O75897 302 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 CD9P21926 228 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 RING1Q06587 406 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 ZNF598Q86UK7 904 aaKnown RBP15.39■□□□□ 0.05
NUP88-207ENST00000573584 SLC13A3Q8WWT9 602 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 UTS2RQ9UKP6 389 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 BLOC1S6Q9UL45 172 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 ERGIC3Q9Y282 383 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 TNPO3Q9Y5L0 923 aaKnown RBP15.39■□□□□ 0.05
NUP88-207ENST00000573584 A0A0U1RQS6 177 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 HTR1AP08908 422 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 NR4A1P22736 598 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 MAGEA11P43364 429 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 BCAP31P51572 246 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 CLCN4P51793 760 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 OXCT1P55809 520 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 PPP2R2BQ00005 443 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 PPP1R8Q12972 351 aaKnown RBP15.39■□□□□ 0.05
NUP88-207ENST00000573584 GTF2H2Q13888 395 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 SPIDRQ14159 915 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 PTGR1Q14914 329 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 PTPRRQ15256 657 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 VARS2Q5ST30 1063 aaKnown RBP15.39■□□□□ 0.05
NUP88-207ENST00000573584 ANKRD34AQ69YU3 496 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 GTF2H2CQ6P1K8 395 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 CRTC3Q6UUV7 619 aa15.39■□□□□ 0.05
NUP88-207ENST00000573584 SLC47A1Q96FL8 570 aa15.39■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms