RNA–Protein interactions for RNA: ENST00000573328.5

NPLOC4-212, Transcript of NPL4 homolog, ubiquitin recognition factor, humanhuman

TSL 2

Gene NPLOC4, Length 428 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPLOC4-212ENST00000573328 DLSTP36957 453 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 STAT5AP42229 794 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 LMAN1P49257 510 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 PRLHRP49683 370 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 GDF10P55107 478 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 XIAPP98170 497 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 MC1RQ01726 317 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 CDC20Q12834 499 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 IL11RAQ14626 422 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 PARP6Q2NL67 630 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 BCL7AQ4VC05 210 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 ZNF449Q6P9G9 518 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 C6orf15Q6UXA7 325 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 TIPARPQ7Z3E1 657 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 PPP1R3BQ86XI6 285 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 DNAAF3Q8N9W5 541 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 GALNT6Q8NCL4 622 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 SPDYE1Q8NFV5 336 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 HM13Q8TCT9 377 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 HEXDCQ8WVB3 486 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 UBXN4Q92575 508 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC45A3Q96JT2 553 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 RMDN2Q96LZ7 410 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 CATSPER2Q96P56 530 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 INSM2Q96T92 566 aaPredicted RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 MAP3K3Q99759 626 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 TSGA10Q9BZW7 698 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 PDE7BQ9NP56 450 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 HRASLS2Q9NWW9 162 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 SOHLH2Q9NX45 425 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 EPHA6Q9UF33 1036 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 RARRES3Q9UL19 164 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 GUCA1BQ9UMX6 200 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 R3HDM2Q9Y2K5 976 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 HEBP2Q9Y5Z4 205 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 MRPS18BQ9Y676 258 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 RPS6KL1Q9Y6S9 549 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 COLEC10Q9Y6Z7 277 aa9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 SNRNP200O75643 2136 aaKnown RBP9.43□□□□□ -0.9
NPLOC4-212ENST00000573328 IGHV5-51A0A0C4DH38 117 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 GSAPA4D1B5 854 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 OR6C74A6NCV1 312 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 OR5K3A6NET4 321 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 TLCD2A6NGC4 264 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 E7EVH7 732 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 PYCARD-AS1I3L0S3 204 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 IFRD1O00458 451 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 NKX2-8O15522 239 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 PSMD3O43242 534 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 LDB2O43679 373 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 KRT86O43790 486 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 KATNA1O75449 491 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 SPAG6O75602 509 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 METTL18O95568 372 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 AP2A1O95782 977 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 GAS8O95995 478 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 IFNB1P01574 187 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 CCNYL3P0C7X3 344 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 EBLN1P0CF75 366 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 SPTBP11277 2137 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ZNF28P17035 718 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 NELFEP18615 380 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ACRV1P26436 265 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 NDUFS1P28331 727 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 CCR10P46092 362 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ARCN1P48444 511 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 POLE2P56282 527 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 NFKB2Q00653 900 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ACY1Q03154 408 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 PRKAA1Q13131 559 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 KLF1Q13351 362 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 MAP7Q14244 749 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 KCNAB1Q14722 419 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 GPR33Q49SQ1 333 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 DENND5AQ6IQ26 1287 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 PPP1R21Q6ZMI0 780 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 LINC00523Q86TU6 105 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 SERPINA9Q86WD7 417 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 LILRA3Q8N6C8 439 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 STYXQ8WUJ0 223 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ATG4AQ8WYN0 398 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 KLHL6Q8WZ60 621 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 TBRG4Q969Z0 631 aaKnown RBP eCLIP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 CCM2Q9BSQ5 444 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 RAB33BQ9H082 229 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC25A18Q9H1K4 315 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 KIR3DX1Q9H7L2 352 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 COG4Q9H9E3 785 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ARNT2Q9HBZ2 717 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 NLE1Q9NVX2 485 aaPredicted RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 ZDHHC3Q9NYG2 299 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 IL17BQ9UHF5 180 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 SLC24A2Q9UI40 661 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 CROTQ9UKG9 612 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 PCDHB3Q9Y5E6 796 aa9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 TLN1Q9Y490 2541 aaKnown RBP9.42□□□□□ -0.9
NPLOC4-212ENST00000573328 TCRBV7S2A1N4TA0A589 114 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 AGAP14A8MT82 685 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 MT-ND3P03897 115 aa9.41□□□□□ -0.9
NPLOC4-212ENST00000573328 PRSS56P0CW18 603 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms