RNA–Protein interactions for RNA: ENST00000572253.5

CCDC40-207, Transcript of coiled-coil domain containing 40, humanhuman

TSL 2

Gene CCDC40, Length 3,962 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-207ENST00000572253 OSBPL10Q9BXB5 764 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 DPY30Q9C005 99 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 SCUBE2Q9NQ36 999 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 ZNF225Q9UK10 706 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 PCDHGA8Q9Y5G5 932 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 MAGED1Q9Y5V3 778 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-207ENST00000572253 PTGES3LE9PB15 166 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 E2F3O00716 465 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 RGS14O43566 566 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 NOBOXO60393 691 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 CD52P31358 61 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 MC4RP32245 332 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 TMED10P49755 219 aaKnown RBP10.6□□□□□ -0.71
CCDC40-207ENST00000572253 OXCT1P55809 520 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 KCNAB2Q13303 367 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 CACHD1Q5VU97 1274 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 LGI2Q8N0V4 545 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 PARP8Q8N3A8 854 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 EFHBQ8N7U6 833 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 SETD9Q8NE22 299 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 EEF1AKMT1Q8WVE0 214 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 PADI3Q9ULW8 664 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 SPO11Q9Y5K1 396 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 DGKBQ9Y6T7 804 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 COL4A4P53420 1690 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-207ENST00000572253 MOXD2PA6NHM9 499 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 H0Y858 1186 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 RAD51BO15315 384 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 NDUFS2O75306 463 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 BCAS1O75363 584 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-207ENST00000572253 TCF3P15923 654 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 KPNA1P52294 538 aaPredicted RBP10.6□□□□□ -0.71
CCDC40-207ENST00000572253 RPL38P63173 70 aaKnown RBP10.6□□□□□ -0.71
CCDC40-207ENST00000572253 GSTM4Q03013 218 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 IL18R1Q13478 541 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 LDLRAP1Q5SW96 308 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 GTF2IRD2BQ6EKJ0 949 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 LETMD1Q6P1Q0 360 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 CD300LGQ6UXG3 332 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 GTF2IRD2Q86UP8 949 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 STK40Q8N2I9 435 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 MINDY2Q8NBR6 621 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 OR7A2PQ8NGA2 310 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 OR52B6Q8NGF0 335 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 OR10A6Q8NH74 314 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 RORBQ92753 470 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 TAMM41Q96BW9 452 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 NSMCE3Q96MG7 304 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 BCL7BQ9BQE9 202 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 MAGEH1Q9H213 219 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 TLR9Q9NR96 1032 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 ENPP5Q9UJA9 477 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 INVSQ9Y283 1065 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 CORINQ9Y5Q5 1042 aa10.6□□□□□ -0.71
CCDC40-207ENST00000572253 A0A0U1RQF3 1178 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 TMEM221A6NGB7 291 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ZNF99A8MXY4 864 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-207ENST00000572253 RECQL5O94762 991 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-207ENST00000572253 CHRNA1P02708 482 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ESR1P03372 595 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ITIH1P19827 911 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 TACR2P21452 398 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 CD9P21926 228 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 CD47Q08722 323 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GTF2H2Q13888 395 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 DGUOKQ16854 277 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 SETMARQ53H47 684 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GNASQ5JWF2 1037 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GTF2H2CQ6P1K8 395 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 NCCRP1Q6ZVX7 275 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GLB1L3Q8NCI6 653 aaPredicted RBP10.59□□□□□ -0.71
CCDC40-207ENST00000572253 TTC16Q8NEE8 873 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 KCNJ9Q92806 393 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 MUL1Q969V5 352 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ZNF583Q96ND8 569 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ADAM2Q99965 735 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ADGRE3Q9BY15 652 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 FKBPLQ9UIM3 349 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 MED16Q9Y2X0 877 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 CXCR6O00574 342 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 INSIG1O15503 277 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 DFNA5O60443 496 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 TBX18O95935 607 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ITGB1P05556 798 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ALOX5P09917 674 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GPR15P49685 360 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 HTR6P50406 440 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 CLCN4P51793 760 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 IL5RAQ01344 420 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 VAC14Q08AM6 782 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ENPP6Q6UWR7 440 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 LRRC8DQ7L1W4 858 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 ADCK1Q86TW2 530 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 SLCO6A1Q86UG4 719 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 HIPK1Q86Z02 1210 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 GALNT13Q8IUC8 556 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 CD200R1Q8TD46 325 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 TRIB3Q96RU7 358 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 HBEGFQ99075 208 aa10.59□□□□□ -0.71
CCDC40-207ENST00000572253 MGME1Q9BQP7 344 aa10.59□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 265.8 ms