RNA–Protein interactions for RNA: ENST00000571442.5

SMG6-209, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 588 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-209ENST00000571442 IARS2Q9NSE4 1012 aaKnown RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 ZDHHC18Q9NUE0 388 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 WHRNQ9P202 907 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CPNE7Q9UBL6 633 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ZMIZ1Q9ULJ6 1067 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 CRYL1Q9Y2S2 319 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ENTPD2Q9Y5L3 495 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 DNMT3AQ9Y6K1 912 aaPredicted RBP6.84□□□□□ -1.31
SMG6-209ENST00000571442 FAM169AQ9Y6X4 670 aa6.84□□□□□ -1.31
SMG6-209ENST00000571442 ZZEF1O43149 2961 aa6.84□□□□□ -1.32
SMG6-209ENST00000571442 ADAMTS20P59510 1910 aa6.84□□□□□ -1.32
SMG6-209ENST00000571442 APC2O95996 2303 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 FASNP49327 2511 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 C17orf113A0A1B0GUU1 675 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 UBA6A0AVT1 1052 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 KRT87PA6NCN2 255 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 TMEM8BA6NDV4 472 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RHPN2P1A8MT19 583 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 D6RAR5 112 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 CFAP99D6REC4 459 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 KIF2AO00139 706 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 PRMT5O14744 637 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 CSO75390 466 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 HAUS5O94927 633 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 AP2A2O94973 939 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 TRIM16O95361 564 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 CAPNS1P04632 268 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RALBP11234 206 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 PNLIPP16233 465 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 XRCC1P18887 633 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 OGNP20774 298 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 IDSP22304 550 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RPS3P23396 243 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMG6-209ENST00000571442 ACADLP28330 430 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 ALDH4A1P30038 563 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 FMO4P31512 558 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RPIAP49247 311 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 PLTPP55058 493 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 EIF3BP55884 814 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 GPX6P59796 221 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 E2F1Q01094 437 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 CBLBQ13191 982 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 LAMB3Q13751 1172 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 GPR18Q14330 331 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 HIF1AQ16665 826 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 LONRF1Q17RB8 773 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 ISXQ2M1V0 245 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 AMZ1Q400G9 498 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 ZNF470Q6ECI4 717 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 CNSTQ6PJW8 725 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 CERS6Q6ZMG9 384 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 CAPN12Q6ZSI9 719 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 MAATS1Q7Z4T9 603 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 KCNMB4Q86W47 210 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 SLITRK4Q8IW52 837 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 OTUD6BQ8N6M0 293 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 SERBP1Q8NC51 408 aaKnown RBP eCLIP6.83□□□□□ -1.32
SMG6-209ENST00000571442 PHC3Q8NDX5 983 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 FBXO36Q8NEA4 188 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 ACVR1CQ8NER5 493 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 GIMAP7Q8NHV1 300 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 HM13Q8TCT9 377 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 ZCCHC14Q8WYQ9 949 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 ELMO1Q92556 727 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RSC1A1Q92681 617 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 GLMNQ92990 594 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 ATXN7L3BQ96GX2 97 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 PRR11Q96HE9 360 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 ZNF514Q96K75 400 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 C12orf66Q96MD2 445 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 SEMA6CQ9H3T2 930 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 EPB41L5Q9HCM4 733 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 SLC40A1Q9NP59 571 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 SAYSD1Q9NPB0 183 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 C20orf96Q9NUD7 363 aaPredicted RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 SAMD15Q9P1V8 674 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RALYQ9UKM9 306 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 CLCA2Q9UQC9 943 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 RUVBL2Q9Y230 463 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 MSRB2Q9Y3D2 182 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 PSAT1Q9Y617 370 aa6.83□□□□□ -1.32
SMG6-209ENST00000571442 DSPP15924 2871 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 SNRNP200O75643 2136 aaKnown RBP6.83□□□□□ -1.32
SMG6-209ENST00000571442 KIR2DS5A0A0G2JLQ3 304 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 A0A0G2JNG1 304 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 MAGEB16A2A368 324 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CTAGE15A4D2H0 777 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CXorf49A8MYA2 514 aaPredicted RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 KIR2DS3K7RE56 304 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 KCNJ13O60928 360 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 GPC4O75487 556 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 NDUFS3O75489 264 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 TUBB4AP04350 444 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 CTAGE8P0CG41 777 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 MTHFD1P11586 935 aaKnown RBP6.82□□□□□ -1.32
SMG6-209ENST00000571442 HGFP14210 728 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 JUPP14923 745 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 TYRP1P17643 537 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 AOAHP28039 575 aa6.82□□□□□ -1.32
SMG6-209ENST00000571442 SSTR1P30872 391 aa6.82□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms