RNA–Protein interactions for RNA: ENST00000570937.1

NUP88-202, Transcript of nucleoporin 88, humanhuman

TSL 3

Gene NUP88, Length 361 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP88-202ENST00000570937 LINC01553A4QN01 128 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 TEX22C9J3V5 150 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 TIMM23O14925 209 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 SLC37A4O43826 429 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 GUCY1B2O75343 617 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 ZBTB11O95625 1053 aaPredicted RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 CHRNA1P02708 482 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 OR52Z1P0C646 297 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 MUTP22033 750 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 YWHABP31946 246 aaKnown RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 RPL3P39023 403 aaKnown RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 CRYBB1P53674 252 aaPredicted RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 GAS1P54826 345 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 PRKCEQ02156 737 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 CYP4A11Q02928 519 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 MARCH8Q5T0T0 291 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 HAUS3Q68CZ6 603 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 MOB3CQ70IA8 216 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 CCDC60Q8IWA6 550 aaPredicted RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 HSCBQ8IWL3 235 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 C4orf19Q8IY42 314 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 CCDC105Q8IYK2 499 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 DEFB123Q8N688 67 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 TMED6Q8WW62 240 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 TCP11Q8WWU5 503 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 SNX21Q969T3 373 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 OTULINQ96BN8 352 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 ELP4Q96EB1 424 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 CEP170P1Q96L14 293 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 UBXN10Q96LJ8 280 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 LRFN5Q96NI6 719 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 MTMR9Q96QG7 549 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 PCYT2Q99447 389 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 RAD9AQ99638 391 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 MMTAG2Q9BU76 263 aaKnown RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 IFIH1Q9BYX4 1025 aaKnown RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 FAM49AQ9H0Q0 323 aaPredicted RBP4.07□□□□□ -1.76
NUP88-202ENST00000570937 OR6C3Q9NZP0 311 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 TRPV2Q9Y5S1 764 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 SCN10AQ9Y5Y9 1956 aa4.07□□□□□ -1.76
NUP88-202ENST00000570937 IGSF9BQ9UPX0 1349 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 KDM3AQ9Y4C1 1321 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 DENND3A2RUS2 1198 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 VPS37CA5D8V6 355 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 GAGE10A6NGK3 116 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 SRRM3A6NNA2 597 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 J3KR12 359 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 EDIL3O43854 480 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 RPS6KA5O75582 802 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 SLITRK3O94933 977 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 LYPLA2O95372 231 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 C22orf31O95567 290 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 STAG3L1P0CL83 205 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 TFPIP10646 304 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 PCNAP12004 261 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 DAOP14920 347 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 ITGAXP20702 1163 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 PRPHP41219 470 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 NR1H2P55055 460 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 VAMP2P63027 116 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 CUL4AQ13619 759 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 TFDP1Q14186 410 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 DHX8Q14562 1220 aaKnown RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 MXD4Q14582 209 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 KIF19Q2TAC6 998 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 XKR9Q5GH70 373 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 FAM69BQ5VUD6 431 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 NAA35Q5VZE5 725 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 KRT79Q5XKE5 535 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 TYW3Q6IPR3 259 aaKnown RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.06□□□□□ -1.76
NUP88-202ENST00000570937 H1FNTQ75WM6 255 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 TBC1D26Q86UD7 250 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 MYOCDQ8IZQ8 938 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 DBF4BQ8NFT6 615 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 HSD17B14Q9BPX1 270 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 EIF2AK1Q9BQI3 630 aaKnown RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 LXNQ9BS40 222 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 POLR3CQ9BUI4 534 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 GCOM2Q9BZD3 368 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 ZSCAN16Q9H4T2 348 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 DDX31Q9H8H2 851 aaKnown RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 ZNF556Q9HAH1 456 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 TUFT1Q9NNX1 390 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 CYSLTR2Q9NS75 346 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 ANKEF1Q9NU02 776 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 BEX4Q9NWD9 120 aaPredicted RBP4.06□□□□□ -1.76
NUP88-202ENST00000570937 HCN3Q9P1Z3 774 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 LRWD1Q9UFC0 647 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 HSF4Q9ULV5 492 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 GINS2Q9Y248 185 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 PCDHGB1Q9Y5G3 927 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 DOCK7Q96N67 2140 aa4.06□□□□□ -1.76
NUP88-202ENST00000570937 MYH7BA7E2Y1 1941 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 ALPK3Q96L96 1907 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 IGKV6-21A0A0C4DH24 114 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 TYW5A2RUC4 315 aaKnown RBP4.05□□□□□ -1.76
NUP88-202ENST00000570937 CPED1A4D0V7 1026 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 HSPB2A8KAH6 182 aa4.05□□□□□ -1.76
NUP88-202ENST00000570937 SMTNL1A8MU46 457 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms