RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 PKD1L2Q7Z442 2459 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 A0A087WV48 116 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 MAGEB16A2A368 324 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 PMS2P1A4D2B8 440 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 CD3EAPO15446 510 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 RRP8O43159 456 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 AVILO75366 819 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 TMEM63AO94886 807 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 FTH1P02794 183 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 SLC35G4P0C7Q5 338 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 OR56A5P0C7T3 313 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 MTHFD1P11586 935 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 HGFP14210 728 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 MPSTP25325 297 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 CSTF2P33240 577 aaKnown RBP eCLIP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 PCBP4P57723 403 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 RPA4Q13156 261 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 CAPRIN2Q6IMN6 1127 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 LRRC69Q6ZNQ3 347 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 CLEC14AQ86T13 490 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 LILRA3Q8N6C8 439 aaPredicted RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 NAT8LQ8N9F0 302 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 ZNF248Q8NDW4 579 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 MFSD3Q96ES6 412 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 RUNDC3BQ96NL0 473 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 DCBLD2Q96PD2 775 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 COG4Q9H9E3 785 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 XAB2Q9HCS7 855 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 IMP3Q9NV31 184 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 PISDQ9UG56 409 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 HEBP2Q9Y5Z4 205 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 CFAP20Q9Y6A4 193 aaKnown RBP13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 COLEC10Q9Y6Z7 277 aa13.51□□□□□ -0.25
HERPUD1-218ENST00000569569 SDR42E2A6NKP2 422 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 CCDC188H7C350 402 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 AGRPO00253 132 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 LIN7AO14910 233 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 OR1I1O60431 355 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 TYRP1P17643 537 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 ITIH1P19827 911 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 NDUFS1P28331 727 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 CD151P48509 253 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 TTPAP49638 278 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 PTK6Q13882 451 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 SEMA3AQ14563 771 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 ZNF658BQ4V348 819 aaPredicted RBP13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 SNAP47Q5SQN1 464 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 CASC4Q6P4E1 433 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 CES3Q6UWW8 571 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 ARHGAP22Q7Z5H3 698 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 PCGF5Q86SE9 256 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 PPIL6Q8IXY8 311 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 AGBL5Q8NDL9 886 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 GPR150Q8NGU9 434 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 SERPINB12Q96P63 405 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 OR52A5Q9H2C5 316 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 OGFRQ9NZT2 677 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 SAMD15Q9P1V8 674 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 ASIC3Q9UHC3 531 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 PCDHGA7Q9Y5G6 932 aa13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 DSPP15924 2871 aaKnown RBP13.5□□□□□ -0.25
HERPUD1-218ENST00000569569 SDK2Q58EX2 2172 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 PCM1Q15154 2024 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 MN1Q10571 1320 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 FAM237BA0A1B0GVD1 139 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 A8MU76 341 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 GOLGA8MH3BSY2 632 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 IFRD1O00458 451 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 DNALI1O14645 258 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 FANCGO15287 622 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 NVLO15381 856 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 CAPN5O15484 640 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 VAPBO95292 243 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 C9P02748 559 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 PAMP19021 973 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 PDHA2P29803 388 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 SLC5A2P31639 672 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 ETV5P41161 510 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 PTGIRP43119 386 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 MAPK10P53779 464 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 PLOD1Q02809 727 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 KRT33BQ14525 404 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 RNASEH2BQ5TBB1 312 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 TMEM164Q5U3C3 297 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 KLHL35Q6PF15 583 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 SYDE1Q6ZW31 735 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 LDB1Q86U70 411 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 JAMLQ86YT9 394 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 KLHL7Q8IXQ5 586 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 MPP5Q8N3R9 675 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 HNRNPLLQ8WVV9 542 aaKnown RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 ELMO1Q92556 727 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 RMDN2Q96LZ7 410 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 CARD6Q9BX69 1037 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 B3GNT4Q9C0J1 378 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 RAB33BQ9H082 229 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 MARCH4Q9P2E8 410 aaPredicted RBP13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 EPHA6Q9UF33 1036 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 KLHL3Q9UH77 587 aa13.49□□□□□ -0.25
HERPUD1-218ENST00000569569 PTPRQQ9UMZ3 2332 aa13.48□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 60.8 ms