RNA–Protein interactions for RNA: ENST00000569429.5

HERPUD1-217, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 562 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-217ENST00000569429 TRAF3IP3Q9Y228 551 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 CDYLQ9Y232 598 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 PCDHB4Q9Y5E5 795 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 HRH3Q9Y5N1 445 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 ADGRG1Q9Y653 693 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 AP1M2Q9Y6Q5 423 aa6.38□□□□□ -1.39
HERPUD1-217ENST00000569429 OR52A4PA6NMU1 304 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 PDZK1P1A8MUH7 402 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 CALUO43852 315 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 STX10O60499 249 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 MTA2O94776 668 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 GOSR1O95249 250 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 CNOT4O95628 575 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 HPP00738 406 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 F10P00742 488 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 MX2P20592 715 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 TNFAIP3P21580 790 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 PSMC2P35998 433 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 RGRP47804 291 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 PREPP48147 710 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 KPNA2P52292 529 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 YBEYP58557 167 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 HSF1Q00613 529 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 NSUN2Q08J23 767 aaKnown RBP eCLIP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 ZNF766Q5HY98 468 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 FBXO38Q6PIJ6 1188 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 RFLNAQ6ZTI6 216 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 C11orf57Q6ZUT1 292 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 FAM20CQ8IXL6 584 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 KBTBD2Q8IY47 623 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 PAF1Q8N7H5 531 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 SGMS2Q8NHU3 365 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 CCDC110Q8TBZ0 833 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 BRIX1Q8TDN6 353 aaKnown RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 SCAMP4Q969E2 229 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 SEC16BQ96JE7 1060 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 NSMCE3Q96MG7 304 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 AGAP2Q99490 1192 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 KRTAP17-1Q9BYP8 105 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 ADAM19Q9H013 955 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 TSPAN10Q9H1Z9 355 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 HRASLS2Q9NWW9 162 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 UBA2Q9UBT2 640 aaPredicted RBP6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 CD84Q9UIB8 345 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 NEU3Q9UQ49 428 aa6.37□□□□□ -1.39
HERPUD1-217ENST00000569429 WASH4PA8MWX3 477 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 H3BMH7 237 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 DDX3YO15523 660 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 TTI1O43156 1089 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 BMP10O95393 424 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 ALBP02768 609 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 PRR35P0CG20 571 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 NR2F2P24468 414 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 CFPP27918 469 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 PTGS2P35354 604 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 SULT1E1P49888 294 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 STK4Q13043 487 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 SNTB1Q13884 538 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 NKAIN1Q4KMZ8 207 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 CBWD6Q4V339 395 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 CBWD3Q5JTY5 395 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 CBWD5Q5RIA9 395 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 UBAP2Q5T6F2 1119 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 C1orf189Q5VU69 101 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 FBXW10Q5XX13 1052 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 TIGD7Q6NT04 549 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 HIBCHQ6NVY1 386 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 RWDD4Q6NW29 188 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 FAM183BPQ6ZVS7 135 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 ACAD11Q709F0 780 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 BNIPLQ7Z465 357 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 PHLDB2Q86SQ0 1253 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 CD163Q86VB7 1156 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 OOSP2Q86WS3 158 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 GPR135Q8IZ08 494 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 TSEN2Q8NCE0 465 aaKnown RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 PIGTQ969N2 578 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 FKBP10Q96AY3 582 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 SCRN2Q96FV2 425 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 ZSCAN31Q96LW9 406 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 PPM1MQ96MI6 270 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 FRMD6Q96NE9 622 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 CPXM1Q96SM3 734 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 TBCBQ99426 244 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 SPSB2Q99619 263 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 TP63Q9H3D4 680 aaPredicted RBP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 WDR54Q9H977 334 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 PDFQ9HBH1 243 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 SLC22A11Q9NSA0 550 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 FANCLQ9NW38 375 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 TAS2R14Q9NYV8 317 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 OR12D3Q9UGF7 316 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 SLC23A2Q9UGH3 650 aa6.36□□□□□ -1.39
HERPUD1-217ENST00000569429 VWFP04275 2813 aa6.35□□□□□ -1.39
HERPUD1-217ENST00000569429 RAI1Q7Z5J4 1906 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-217ENST00000569429 TTC24A2A3L6 582 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-217ENST00000569429 NPIPB15A6NHN6 443 aaPredicted RBP6.35□□□□□ -1.39
HERPUD1-217ENST00000569429 GPR89AB7ZAQ6 455 aa6.35□□□□□ -1.39
HERPUD1-217ENST00000569429 H3BQV1 296 aa6.35□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms