RNA–Protein interactions for RNA: ENST00000569422.1

LINC00558-201, long intergenic non-protein coding RNA 558, humanhuman

TSL 1 (best) BASIC

Gene LINC00558, Length 3,163 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00558-201ENST00000569422 CRLS1Q9UJA2 301 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 PRKAB1Q9Y478 270 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 POLR3HQ9Y535 204 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 GPR45Q9Y5Y3 372 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TCRBV3S1A0A5B6 114 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 SLC2A4P14672 509 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 PSMA4P25789 261 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 GSK3BP49841 420 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 BCL2L1Q07817 233 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 GRM2Q14416 872 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ALG1LQ6GMV1 187 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 APLFQ8IW19 511 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 MYO19Q96H55 970 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 VPS50Q96JG6 964 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TCF12Q99081 682 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 CCT7Q99832 543 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 FARSBQ9NSD9 589 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 MRGBPQ9NV56 204 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 IL17CQ9P0M4 197 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 SARDHQ9UL12 918 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 OAZ3Q9UMX2 235 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TBC1D30Q9Y2I9 924 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RNF11Q9Y3C5 154 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TRIM17Q9Y577 477 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ASPDHA6ND91 283 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 MLYCDO95822 493 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 PENKP01210 267 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 GABRR2P28476 465 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RPL5P46777 297 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RPL38P63173 70 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TRAP1Q12931 704 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ARHGEF7Q14155 803 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 INPP5AQ14642 412 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ABRAXAS2Q15018 415 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 MYLK3Q32MK0 819 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RFTN2Q52LD8 501 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 OTUD3Q5T2D3 398 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 CWF19L1Q69YN2 538 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 Q6ZSR9 355 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RFLNAQ6ZTI6 216 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RTL10Q7L3V2 364 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 OFCC1Q8IZS5 231 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF786Q8N393 782 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 SFRP1Q8N474 314 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 SLAIN1Q8ND83 568 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 C2orf15Q8WU43 125 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 GLMNQ92990 594 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TMIGD2Q96BF3 282 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 RNF145Q96MT1 663 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 HOPXQ9BPY8 73 aaPredicted RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 TSEN34Q9BSV6 310 aaKnown RBP8.63□□□□□ -1.03
LINC00558-201ENST00000569422 AASDHPPTQ9NRN7 309 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 WWOXQ9NZC7 414 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 KLQ9UEF7 1012 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 CIDEBQ9UHD4 219 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 CD84Q9UIB8 345 aa8.63□□□□□ -1.03
LINC00558-201ENST00000569422 A0A1W2PP18 115 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 H3BSA7 217 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 FFAR2O15552 330 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 HTRA2O43464 458 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PTGER3P43115 390 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 CTSOP43234 321 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 CLCN7P51798 805 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 ROR2Q01974 943 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PPP1R8Q12972 351 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 GTF2H2Q13888 395 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PTGR1Q14914 329 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PHKG1Q16816 387 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 AP5B1Q2VPB7 878 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 GTF2H2CQ6P1K8 395 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 GOLGA7Q7Z5G4 137 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 CMTR2Q8IYT2 770 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 ADGRG2Q8IZP9 1017 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 LINC00469Q8N7U9 141 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 MAGEE2Q8TD90 523 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 KCNJ9Q92806 393 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 TBRG4Q969Z0 631 aaKnown RBP eCLIP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PHF12Q96QT6 1004 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 GPATCH1Q9BRR8 931 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 LIN28AQ9H9Z2 209 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PHF24Q9UPV7 400 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 VPS9D1Q9Y2B5 631 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 GREB1Q4ZG55 1949 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 DOCK4Q8N1I0 1966 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 BBIP1A8MTZ0 92 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 MTX2O75431 263 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 PABPC4LP0CB38 370 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 ZNF7P17097 686 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 FASP25445 335 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 NFKBIAP25963 317 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 HNF1BP35680 557 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 ATP4BP51164 291 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 CACNG1Q06432 222 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 BTG3Q14201 252 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 SELPLGQ14242 412 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 CHRNA6Q15825 494 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 ZIK1Q3SY52 487 aaPredicted RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 C5orf22Q49AR2 442 aa8.62□□□□□ -1.03
LINC00558-201ENST00000569422 AARS2Q5JTZ9 985 aaKnown RBP8.62□□□□□ -1.03
LINC00558-201ENST00000569422 NANOGP8Q6NSW7 305 aa8.62□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 24.7 ms