RNA–Protein interactions for RNA: ENST00000569243.5

UBR1-209, Transcript of ubiquitin protein ligase E3 component n-recognin 1, human

TSL 3

Gene UBR1, Length 702 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
UBR1-209	ENST00000569243	CDC16	Q13042	620 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	LRIF1	Q5T3J3	769 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	ACSM2B	Q68CK6	577 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	NGEF	Q8N5V2	710 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	GRHL3	Q8TE85	626 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	AGAP3	Q96P47	875 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	C9orf78	Q9NZ63	289 aa	Predicted RBP	2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	DNAJB4	Q9UDY4	337 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	MTMR6	Q9Y217	621 aa		2.94	□□□□□ -1.94
UBR1-209	ENST00000569243	TEX13D	A0A0J9YY54	714 aa	Predicted RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	TMEM8B	A6NDV4	472 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243		A8MZ25	164 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	AGR2	O95994	175 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	TMEM11	P17152	192 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	ANXA7	P20073	488 aa	Known RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	PIK3CA	P42336	1068 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	SNX16	P57768	344 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	SNRPD1	P62314	119 aa	Known RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	TBCE	Q15813	527 aa	Predicted RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	TST	Q16762	297 aa	Known RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	GTDC1	Q4AE62	458 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	RARS2	Q5T160	578 aa	Known RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	JADE1	Q6IE81	842 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	PSRC1	Q6PGN9	363 aa	Predicted RBP	2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	BHLHB9	Q6PI77	547 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	MMS22L	Q6ZRQ5	1243 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	ZNF534	Q76KX8	674 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	GALNT5	Q7Z7M9	940 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	POMGNT1	Q8WZA1	660 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	MOAP1	Q96BY2	351 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	C1orf74	Q96LT6	269 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	GFI1	Q99684	422 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	C1QTNF1	Q9BXJ1	281 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	PLCXD1	Q9NUJ7	323 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	RABGAP1	Q9Y3P9	1069 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	CSAG2	Q9Y5P2	127 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	CROCC	Q5TZA2	2017 aa		2.93	□□□□□ -1.94
UBR1-209	ENST00000569243	FAM237B	A0A1B0GVD1	139 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	OR2M5	A3KFT3	312 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243		F5H0A9	414 aa	Predicted RBP	2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	PLOD2	O00469	737 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	OGG1	O15527	345 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	SYNCRIP	O60506	623 aa	Known RBP	2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	ZNF217	O75362	1048 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	RAF1	P04049	648 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	TPO	P07202	933 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	KRT19	P08727	400 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	LAMP2	P13473	410 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	ATP1A3	P13637	1013 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	HRH2	P25021	359 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	CEACAM8	P31997	349 aa	Predicted RBP	2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	PRAME	P78395	509 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	SNAI3	Q3KNW1	292 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	XKR6	Q5GH73	641 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	GORAB	Q5T7V8	394 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	PWWP2B	Q6NUJ5	590 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	CCDC190	Q86UF4	302 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	L3MBTL4	Q8NA19	623 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	OR8K5	Q8NH50	307 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	CCDC34	Q96HJ3	373 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	FOXN4	Q96NZ1	517 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	NUDCD1	Q96RS6	583 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	SLC22A12	Q96S37	553 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	IWS1	Q96ST2	819 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	SYT15	Q9BQS2	421 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	RRP7BP	Q9NSQ0	103 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	DIAPH3	Q9NSV4	1193 aa		2.92	□□□□□ -1.94
UBR1-209	ENST00000569243	DBNL	Q9UJU6	430 aa	Known RBP	2.92	□□□□□ -1.94
UBR1-209	ENST00000569243		B4E171	279 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	NPHP1	O15259	732 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	KCNK5	O95279	499 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	SCGB1D1	O95968	90 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	CHM	P24386	653 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	SHC1	P29353	583 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	TSPAN7	P41732	249 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	PTGER3	P43115	390 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	CCR10	P46092	362 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	MPP1	Q00013	466 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	EIF4A2	Q14240	407 aa	Known RBP	2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	ZDHHC20	Q5W0Z9	365 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	TMEM154	Q6P9G4	183 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	CFAP77	Q6ZQR2	320 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	PXK	Q7Z7A4	578 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	CPLX4	Q7Z7G2	160 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	TICAM1	Q8IUC6	712 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	MCEMP1	Q8IX19	187 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	EXOC8	Q8IYI6	725 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	TDRD7	Q8NHU6	1098 aa	Known RBP	2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	TMEM143	Q96AN5	459 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	WDFY2	Q96P53	400 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	OR2A14	Q96R47	310 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	PKP2	Q99959	881 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	SLC26A6	Q9BXS9	759 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	PRR34	Q9NV39	138 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	KLK13	Q9UKR3	277 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	NENF	Q9UMX5	172 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	ZHX2	Q9Y6X8	837 aa		2.91	□□□□□ -1.94
UBR1-209	ENST00000569243	IGLV9-49	A0A0B4J1Y8	123 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	PLEKHD1	A6NEE1	506 aa		2.9	□□□□□ -1.95
UBR1-209	ENST00000569243	CDRT15L2	A8MXV6	281 aa		2.9	□□□□□ -1.95

Retrieved 100 of 20,778 RNA–protein pairs in 27.9 ms