RNA–Protein interactions for RNA: ENST00000568881.1

NEIL1-220, Transcript of nei like DNA glycosylase 1, humanhuman

TSL 3

Gene NEIL1, Length 587 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEIL1-220ENST00000568881 FAM96AQ9H5X1 160 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 VPS37BQ9H9H4 285 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 CATSPERZQ9NTU4 200 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 ZC3H7BQ9UGR2 993 aaKnown RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 TMPRSS11EQ9UL52 423 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 TEX264Q9Y6I9 313 aa13.52□□□□□ -0.25
NEIL1-220ENST00000568881 ARHGEF17Q96PE2 2063 aaPredicted RBP13.52□□□□□ -0.25
NEIL1-220ENST00000568881 APC2O95996 2303 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ACACAQ13085 2346 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 TRBV5-4A0A0C4DH59 114 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 OR51F1A6NGY5 319 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 HGSO14964 777 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 CD3EAPO15446 510 aaKnown RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 GPR39O43194 453 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 TNFSF15O95150 251 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 VIPP01282 170 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 EIF2S3P41091 472 aaKnown RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ELK3P41970 407 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SQSTM1Q13501 440 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 LONRF1Q17RB8 773 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 PLA2G4EQ3MJ16 856 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SPANXN3Q5MJ09 141 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 HP1BP3Q5SSJ5 553 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 CHCHD2P9Q5T1J5 151 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ZNF648Q5T619 568 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 MRNIPQ6NTE8 343 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ZNF449Q6P9G9 518 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 WASH2PQ6VEQ5 465 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SDCCAG8Q86SQ7 713 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SERPINA9Q86WD7 417 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 CCDC25Q86WR0 208 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ANKMY2Q8IV38 441 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ZBED8Q8IZ13 594 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 BEND7Q8N7W2 519 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 LRRN4CLQ8ND94 238 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 OR4D9Q8NGE8 314 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 PYROXD1Q8WU10 500 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SLC46A1Q96NT5 459 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 FCRL3Q96P31 734 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 COPS8Q99627 209 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 PHACTR1Q9C0D0 580 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 SAYSD1Q9NPB0 183 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 WASH6PQ9NQA3 447 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ZDHHC18Q9NUE0 388 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 POT1Q9NUX5 634 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ZDHHC3Q9NYG2 299 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 CPNE7Q9UBL6 633 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ATXN7L1Q9ULK2 861 aaPredicted RBP13.51□□□□□ -0.25
NEIL1-220ENST00000568881 CHMP2BQ9UQN3 213 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 DNAJC16Q9Y2G8 782 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ST14Q9Y5Y6 855 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 FAM169AQ9Y6X4 670 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 ATRXP46100 2492 aa13.51□□□□□ -0.25
NEIL1-220ENST00000568881 COL27A1Q8IZC6 1860 aaPredicted RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 TRBV23OR9-2A0A075B6M9 112 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 IGHV1OR21-1A0A087WYE8 117 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 LILRA5A6NI73 299 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 F8W8V4 182 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 PFDN6O15212 129 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 PPM1DO15297 605 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 B4GAT1O43505 415 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 XRCC1P18887 633 aaPredicted RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 FOXN2P32314 431 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 CSTF2P33240 577 aaKnown RBP eCLIP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 TTPAP49638 278 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 PDX1P52945 283 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 UCNP55089 124 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 ZFP36L1Q07352 338 aaKnown RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 THOC5Q13769 683 aaKnown RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 CRYMQ14894 314 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 AGAP9Q5VTM2 703 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 TMEM220Q6QAJ8 160 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 USP53Q70EK8 1073 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 B3GNT8Q7Z7M8 397 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 IGDCC3Q8IVU1 814 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 PIANPQ8IYJ0 282 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 OTUD6BQ8N6M0 293 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 FBXO36Q8NEA4 188 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 GABPB2Q8TAK5 448 aaPredicted RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 CALML6Q8TD86 181 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 KCNE4Q8WWG9 221 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 CXorf40BQ96DE9 158 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 CFAP36Q96G28 342 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 TRIM56Q9BRZ2 755 aaKnown RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 DPH1Q9BZG8 443 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 UCK1Q9HA47 277 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 RDH14Q9HBH5 336 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 PRDM8Q9NQV8 689 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 C20orf96Q9NUD7 363 aaPredicted RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 LOXL2Q9Y4K0 774 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 ZFC3H1O60293 1989 aaKnown RBP13.5□□□□□ -0.25
NEIL1-220ENST00000568881 PKD1L2Q7Z442 2459 aa13.5□□□□□ -0.25
NEIL1-220ENST00000568881 BPTFQ12830 3046 aa13.49□□□□□ -0.25
NEIL1-220ENST00000568881 ZCWPW2A0A1B0GU75 182 aa13.49□□□□□ -0.25
NEIL1-220ENST00000568881 PMS2P1A4D2B8 440 aa13.49□□□□□ -0.25
NEIL1-220ENST00000568881 A6NCN8 305 aa13.49□□□□□ -0.25
NEIL1-220ENST00000568881 QSOX1O00391 747 aa13.49□□□□□ -0.25
NEIL1-220ENST00000568881 POP7O75817 140 aaKnown RBP13.49□□□□□ -0.25
NEIL1-220ENST00000568881 ACRV1P26436 265 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 47.9 ms