RNA–Protein interactions for RNA: ENST00000568848.5

USB1-214, Transcript of U6 snRNA biogenesis phosphodiesterase 1, humanhuman

TSL 4

Gene USB1, Length 548 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USB1-214ENST00000568848 DPM1O60762 260 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 PROSCO94903 275 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 POLBP06746 335 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 GPR89BP0CG08 455 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 ST6GAL1P15907 406 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 KDELR1P24390 212 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 CD68P34810 354 aaPredicted RBP14.46□□□□□ -0.09
USB1-214ENST00000568848 VAV2P52735 878 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 PDE1BQ01064 536 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 OLIG2Q13516 323 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 DEFB110Q30KQ9 67 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 C1orf189Q5VU69 101 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 IZUMO3Q5VZ72 239 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 SPOCD1Q6ZMY3 1216 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 SYTL1Q8IYJ3 562 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 OR4E2Q8NGC2 313 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 PNPLA2Q96AD5 504 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 VPS35Q96QK1 796 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 NAT10Q9H0A0 1025 aaKnown RBP14.46□□□□□ -0.09
USB1-214ENST00000568848 CBX8Q9HC52 389 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 CTTNBP2NLQ9P2B4 639 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 SLC24A2Q9UI40 661 aa14.46□□□□□ -0.09
USB1-214ENST00000568848 FBN2P35556 2912 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 A0A1B0GTH6 734 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 ARHGAP10A1A4S6 786 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 C3orf70A6NLC5 250 aaPredicted RBP14.45□□□□□ -0.1
USB1-214ENST00000568848 NDST3O95803 873 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 DDAH2O95865 285 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 TNNT1P13805 278 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 MX2P20592 715 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 PPP2R5EQ16537 467 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 SIRPB2Q5JXA9 342 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 PDPK2PQ6A1A2 396 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 TRIM73Q86UV7 250 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 OOSP2Q86WS3 158 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 RBM12BQ8IXT5 1001 aaKnown RBP14.45□□□□□ -0.1
USB1-214ENST00000568848 TTC25Q96NG3 672 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 SLC25A51Q9H1U9 297 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 XKR8Q9H6D3 395 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 GLOD4Q9HC38 313 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 POLEQ07864 2286 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 APCP25054 2843 aa14.45□□□□□ -0.1
USB1-214ENST00000568848 GSAPA4D1B5 854 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 ANKUB1A6NFN9 424 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 SMTNL1A8MU46 457 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 BTN3A3O00478 584 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 LDB2O43679 373 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 CNOT3O75175 753 aaKnown RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 ZBTB11O95625 1053 aaPredicted RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 CBSLP0DN79 551 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 VCLP18206 1134 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 NFKB1P19838 968 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 HLA-DPA1P20036 260 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 CDH3P22223 829 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 PTPN3P26045 913 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 CBSP35520 551 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 SPAM1P38567 509 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 WNT3AP56704 352 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 DMPKQ09013 629 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 MESDQ14696 234 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 PDK2Q15119 407 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 ALKBH5Q6P6C2 394 aaKnown RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 KDELC1Q6UW63 502 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 CUZD1Q86UP6 607 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 BLOC1S5Q8TDH9 187 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 RNF25Q96BH1 459 aaPredicted RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 OXNAD1Q96HP4 312 aaPredicted RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 OLFM3Q96PB7 478 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 FCRL4Q96PJ5 515 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 SMAD5Q99717 465 aaKnown RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 BPIFA3Q9BQP9 254 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 NLNQ9BYT8 704 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 SLC29A3Q9BZD2 475 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 C10orf88Q9H8K7 445 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 ACTR5Q9H9F9 607 aaPredicted RBP14.44□□□□□ -0.1
USB1-214ENST00000568848 NENFQ9UMX5 172 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 SLC5A6Q9Y289 635 aa14.44□□□□□ -0.1
USB1-214ENST00000568848 C2CD3Q4AC94 2353 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 GLYATL1P3A0A0U1RQE8 302 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 SYCE3A1L190 88 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 CCL22O00626 93 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 SGTAO43765 313 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 SNRNP200O75643 2136 aaKnown RBP14.43□□□□□ -0.1
USB1-214ENST00000568848 KLK3P07288 261 aaPredicted RBP14.43□□□□□ -0.1
USB1-214ENST00000568848 PECAM1P16284 738 aaPredicted RBP14.43□□□□□ -0.1
USB1-214ENST00000568848 AKT1P31749 480 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 PREPP48147 710 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 SRSF11Q05519 484 aaKnown RBP14.43□□□□□ -0.1
USB1-214ENST00000568848 IQCB1Q15051 598 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 NCF4Q15080 339 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 MLIPQ5VWP3 458 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 METRNLQ641Q3 311 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 ARMC6Q6NXE6 501 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 MRGPREQ86SM8 312 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 RFX6Q8HWS3 928 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 GLIS1Q8NBF1 620 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 PHC3Q8NDX5 983 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 IPMKQ8NFU5 416 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 CPT1BQ92523 772 aa14.43□□□□□ -0.1
USB1-214ENST00000568848 MRGPRX2Q96LB1 330 aa14.43□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms