RNA–Protein interactions for RNA: ENST00000568338.1

KLHDC4-220, Transcript of kelch domain containing 4, humanhuman

TSL 4

Gene KLHDC4, Length 584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC4-220ENST00000568338 RPS3P23396 243 aaKnown RBP eCLIP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CRABP2P29373 138 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 UGT1A3P35503 534 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 UGT1A5P35504 534 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 MAGEA12P43365 314 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CDKN1CP49918 316 aaPredicted RBP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 TPMTP51580 245 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 UCNP55089 124 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 TMPRSS3P57727 454 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 RAB10P61026 200 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 AGERQ15109 404 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 ZKSCAN8Q15776 578 aaPredicted RBP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 RBM20Q5T481 1227 aaKnown RBP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 HECTD2Q5U5R9 776 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 RAET1GQ6H3X3 334 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 KDM7AQ6ZMT4 941 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 RAPH1Q70E73 1250 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 PRICKLE2Q7Z3G6 844 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CCDC91Q7Z6B0 441 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CMC1Q7Z7K0 106 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 NLRP8Q86W28 1048 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 PHYKPLQ8IUZ5 450 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CADM4Q8NFZ8 388 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 GDAP1Q8TB36 358 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 HEXDCQ8WVB3 486 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 FGF11Q92914 225 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 TOE1Q96GM8 510 aaKnown RBP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 NDNQ99608 321 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 KLF6Q99612 283 aaPredicted RBP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 COPS8Q99627 209 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 AARSD1Q9BTE6 412 aaKnown RBP8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 GPR174Q9BXC1 333 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 FAM117AQ9C073 453 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 NRSN2Q9GZP1 204 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CLPBQ9H078 707 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 BTBD1Q9H0C5 482 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CAB39LQ9H9S4 337 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 POPDC3Q9HBV1 291 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 SGK2Q9HBY8 427 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 CD93Q9NPY3 652 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 ITM2CQ9NQX7 267 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 PCMTD2Q9NV79 361 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 ZDHHC3Q9NYG2 299 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 TLK1Q9UKI8 766 aa8.47□□□□□ -1.05
KLHDC4-220ENST00000568338 URB1O60287 2271 aaKnown RBP8.46□□□□□ -1.05
KLHDC4-220ENST00000568338 IGLV3-16A0A075B6K0 115 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3DA0A087WVF3 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3IA0A087WXS9 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3EA0A087X179 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 A0A087X1B8 175 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3KA0A087X1G2 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 A0A1B0GVT2 93 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 A0A1W2PQU0 124 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TMEM120BA0PK00 339 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3FA6NER0 549 aaPredicted RBP8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 IGLON5A6NGN9 336 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 FAM47DPA6NHR8 397 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 FADS2P1A8MWK0 482 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3LB9A6J9 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 F8W8V4 182 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 GOLGA8RI6L899 631 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 QSOX1O00391 747 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 COPEO14579 308 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 OR1I1O60431 355 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 RNGTTO60942 597 aaKnown RBP8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 GLRA3O75311 464 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 VPS26AO75436 327 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3HP0C7X1 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 CDK4P11802 303 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 PKMP14618 531 aaKnown RBP8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 SAT1P21673 171 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 CD9P21926 228 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 FDXRP22570 491 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 OXTRP30559 389 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 AKT1P31749 480 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 NSG1P42857 185 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 GPR1P46091 355 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 CCT8P50990 548 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 AFF3P51826 1226 aaKnown RBP8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 SLC18A1P54219 525 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 BNC1Q01954 994 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 SLC18A2Q05940 514 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 SGCGQ13326 291 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 LY6DQ14210 128 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 RTP5Q14D33 572 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 LRRC14Q15048 493 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TEAD4Q15561 434 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TMEM259Q4ZIN3 620 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 LDLRAP1Q5SW96 308 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 GPRC6AQ5T6X5 926 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 SEL1L3Q68CR1 1132 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3GQ6DHY5 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 PTRHD1Q6GMV3 140 aaKnown RBP8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TBC1D3CQ6IPX1 549 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 UGT3A1Q6NUS8 523 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 ZNF549Q6P9A3 640 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 FAM124AQ86V42 546 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 LCA5Q86VQ0 697 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 TRIM69Q86WT6 500 aa8.46□□□□□ -1.06
KLHDC4-220ENST00000568338 HORMAD1Q86X24 394 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 64.5 ms