RNA–Protein interactions for RNA: ENST00000568158.1

CNOT1-213, Transcript of CCR4-NOT transcription complex subunit 1, humanhuman

TSL 3

Gene CNOT1, Length 496 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT1-213ENST00000568158 FMO4P31512 558 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 ELK3P41970 407 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 TTPAP49638 278 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CSE1LP55060 971 aaKnown RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 INHBCP55103 352 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 ZFP36L1Q07352 338 aaKnown RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CTBP1Q13363 440 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 SQSTM1Q13501 440 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 TRADDQ15628 312 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 AARS2Q5JTZ9 985 aaKnown RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 ARMC3Q5W041 872 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 DUPD1Q68J44 220 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CENPUQ71F23 418 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 OR10G6Q8NH81 332 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 LKAAEAR1Q8TD35 194 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 NCSTNQ92542 709 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 RMDN2Q96LZ7 410 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CARD6Q9BX69 1037 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 P2RY12Q9H244 342 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 EPB41L5Q9HCM4 733 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 C20orf96Q9NUD7 363 aaPredicted RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 IMP3Q9NV31 184 aaKnown RBP12.72□□□□□ -0.37
CNOT1-213ENST00000568158 CRYL1Q9Y2S2 319 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 AK5Q9Y6K8 562 aa12.72□□□□□ -0.37
CNOT1-213ENST00000568158 UBA6A0AVT1 1052 aaPredicted RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 SLC5A10A0PJK1 596 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 KLHL33A6NCF5 533 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 A8MU76 341 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 QSOX1O00391 747 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 S1PR4O95977 384 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 FTH1P02794 183 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 TUBB4AP04350 444 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 MPOP05164 745 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 MTHFD1P11586 935 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 AMD1P17707 334 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 CCR7P32248 378 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 CSF2RBP32927 897 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 EIF3BP55884 814 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 GPLD1P80108 840 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 SLC7A5Q01650 507 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 CKAP4Q07065 602 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 THOC5Q13769 683 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 GPR18Q14330 331 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 RTP5Q14D33 572 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 LONRF1Q17RB8 773 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 MAP9Q49MG5 647 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 DNAJC21Q5F1R6 531 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 C3orf38Q5JPI3 329 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 PHF19Q5T6S3 580 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 PTRHD1Q6GMV3 140 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 MRNIPQ6NTE8 343 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 TMEM71Q6P5X7 295 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 FOXR1Q6PIV2 292 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 ANKMY2Q8IV38 441 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 SLITRK4Q8IW52 837 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 DENND6AQ8IWF6 608 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 PDIK1LQ8N165 341 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 TMEM74Q96NL1 305 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 FERD3LQ96RJ6 166 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 TCF12Q99081 682 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 NRTNQ99748 197 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 LRRC1Q9BTT6 524 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 NRSN2Q9GZP1 204 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 OR52A5Q9H2C5 316 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 VPS37BQ9H9H4 285 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 UCK1Q9HA47 277 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 IARS2Q9NSE4 1012 aaKnown RBP12.71□□□□□ -0.37
CNOT1-213ENST00000568158 POT1Q9NUX5 634 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 OGFRQ9NZT2 677 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 SATB2Q9UPW6 733 aa12.71□□□□□ -0.37
CNOT1-213ENST00000568158 IGHV5-10-1A0A0J9YXX1 117 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 LILRA5A6NI73 299 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 BHMG1C9JSJ3 638 aaPredicted RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 SMAPO00193 183 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 TAF4O00268 1085 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 UBXN7O94888 489 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 PROS1P07225 676 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 SLC35G4P0C7Q5 338 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 ERVK-10P10266 1014 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 PGAM1P18669 254 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 LIMK2P53671 638 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 EPHA4P54764 986 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 ARL4CP56559 192 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 PDIA2Q13087 525 aaKnown RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 BOP1Q14137 746 aaKnown RBP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 KRT33BQ14525 404 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 WHAMMP3Q1A5X7 153 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 TYSND1Q2T9J0 566 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 HSP90AA5PQ58FG0 334 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 CTSL3PQ5NE16 218 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 SNAP47Q5SQN1 464 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 ZNF449Q6P9G9 518 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 CILP2Q8IUL8 1156 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 VRK3Q8IV63 474 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 SPNS2Q8IVW8 549 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 AVL9Q8NBF6 648 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 SERBP1Q8NC51 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
CNOT1-213ENST00000568158 RCBTB1Q8NDN9 531 aa12.7□□□□□ -0.38
CNOT1-213ENST00000568158 LPGAT1Q92604 370 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.2 ms