RNA–Protein interactions for RNA: ENST00000566915.5

LPCAT2-208, Transcript of lysophosphatidylcholine acyltransferase 2, humanhuman

TSL 1 (best)

Gene LPCAT2, Length 5,285 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LPCAT2-208ENST00000566915 OMPP47874 163 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 ATP12AP54707 1039 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 HTRA3P83110 453 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 HSF2Q03933 536 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 SEMA3AQ14563 771 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 FASTKD3Q14CZ7 662 aaKnown RBP4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 PUS10Q3MIT2 529 aaKnown RBP4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 HSDL1Q3SXM5 330 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF311Q5JNZ3 666 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 NOMO2Q5JPE7 1267 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 EEF1DP3Q658K8 133 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 SLC9A4Q6AI14 798 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 FBXL19Q6PCT2 694 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF773Q6PK81 442 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 UBE2R2Q712K3 238 aaPredicted RBP4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 SLITRK4Q8IW52 837 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 CRYBG2Q8N1P7 616 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 C1orf127Q8N9H9 656 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 OR4A15Q8NGL6 344 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 PCDH19Q8TAB3 1148 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 C1GALT1C1Q96EU7 318 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF514Q96K75 400 aaPredicted RBP4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 GPR22Q99680 433 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 UNKQ9C0B0 810 aaKnown RBP4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 MMP27Q9H306 513 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 BRD9Q9H8M2 597 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 IPPKQ9H8X2 491 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 RMI1Q9H9A7 625 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 CAB39LQ9H9S4 337 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 ZFYVE1Q9HBF4 777 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 NECTIN3Q9NQS3 549 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 MRPL17Q9NRX2 175 aaKnown RBP4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 TBC1D14Q9P2M4 693 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 POFUT2Q9Y2G5 429 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF780BQ9Y6R6 833 aa4.3□□□□□ -1.72
LPCAT2-208ENST00000566915 AFDNP55196 1824 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 GLYATL1P3A0A0U1RQE8 302 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 STX16-NPEPL1H3BU86 382 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 STX16O14662 325 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 FPGTO14772 594 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 LSM1O15116 133 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 DENRO43583 198 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 TLL1O43897 1013 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 TYROBPO43914 113 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ENO2P09104 434 aaPredicted RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CBSLP0DN79 551 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CBSP35520 551 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CCNFP41002 786 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ALDH3A2P51648 485 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 SLC5A3P53794 718 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 AP1S2P56377 157 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 SRP54P61011 504 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CYP4F3Q08477 520 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 GTF2H2Q13888 395 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 GK3PQ14409 553 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 GRB14Q14449 540 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 SMCO1Q147U7 214 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 LARS2Q15031 903 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 PLCL1Q15111 1095 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 DLG2Q15700 870 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CPSF6Q16630 551 aaKnown RBP eCLIP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 UGCGQ16739 394 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 NADK2Q4G0N4 442 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 MPPE1Q53F39 396 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 PLEKHG4Q58EX7 1191 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 GTF2H2CQ6P1K8 395 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 KLHDC10Q6PID8 442 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CYP2U1Q7Z449 544 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 KRT77Q7Z794 578 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ZDHHC21Q8IVQ6 265 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 GPALPP1Q8IXQ4 340 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CHPFQ8IZ52 775 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 DRAXINQ8NBI3 349 aaPredicted RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 SUN5Q8TC36 379 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CXorf40AQ8TE69 158 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 HDAC2Q92769 488 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 RIT1Q92963 219 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 PLD4Q96BZ4 506 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ERMAPQ96PL5 475 aaPredicted RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 COPS4Q9BT78 406 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ADAMTS10Q9H324 1103 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF696Q9H7X3 374 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ZBTB26Q9HCK0 441 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CHRAC1Q9NRG0 131 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 INTS7Q9NVH2 962 aaKnown RBP4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ZNF222Q9UK12 451 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 RAB23Q9ULC3 237 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 SLC27A6Q9Y2P4 619 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 WASF2Q9Y6W5 498 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 IRS2Q9Y4H2 1338 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 SMIM28A0A1B0GU29 152 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 KLHL33A6NCF5 533 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 MAGEB17A8MXT2 336 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ARVCFO00192 962 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ABCB7O75027 752 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 ATG13O75143 517 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 CLPXO76031 633 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 IFNA7P01567 189 aa4.29□□□□□ -1.72
LPCAT2-208ENST00000566915 EPORP19235 508 aa4.29□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms