RNA–Protein interactions for RNA: ENST00000566843.1

COMMD4-215, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 2,284 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-215ENST00000566843 MARC1Q5VT66 337 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 TMEM236Q5W0B7 351 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 UGT3A1Q6NUS8 523 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 SPESP1Q6UW49 350 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 GPRIN3Q6ZVF9 776 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 TMEM179BQ7Z7N9 219 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 ADHFE1Q8IWW8 467 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 OR2T12Q8NG77 320 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 FRS2Q8WU20 508 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 C17orf50Q8WW18 174 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 FIG4Q92562 907 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 NSMCE3Q96MG7 304 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 SLIRPQ9GZT3 109 aaKnown RBP15.45■□□□□ 0.06
COMMD4-215ENST00000566843 EHD1Q9H4M9 534 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 PCDH12Q9NPG4 1184 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 CATSPERZQ9NTU4 200 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 ERVK-18Q9QC07 812 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 ADGRE2Q9UHX3 823 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 VPS51Q9UID3 782 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 HS3ST4Q9Y661 456 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 MRPL42Q9Y6G3 142 aaKnown RBP15.45■□□□□ 0.06
COMMD4-215ENST00000566843 GBF1Q92538 1859 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 ANKRD12Q6UB98 2062 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 MBLAC1A4D2B0 266 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-215ENST00000566843 FAM47E-STBD1D6RA91 191 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 J3KR12 359 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 CDC7O00311 574 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 HS6ST1O60243 411 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 RHOBTB1O94844 696 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 SCELO95171 688 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 CYP11A1P05108 521 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 VBP1P61758 197 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 PHC1P78364 1004 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 RAD51Q06609 339 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 LAPTM5Q13571 262 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 RBBP7Q16576 425 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 FBXO48Q5FWF7 155 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 EID3Q8N140 333 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 KLHL5Q96PQ7 755 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 ZNF382Q96SR6 550 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 TPK1Q9H3S4 243 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 MAGIXQ9H6Y5 334 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 AGO3Q9H9G7 860 aaKnown RBP15.45■□□□□ 0.06
COMMD4-215ENST00000566843 UXTQ9UBK9 157 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-215ENST00000566843 LIMD1Q9UGP4 676 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 EVLQ9UI08 416 aaPredicted RBP15.45■□□□□ 0.06
COMMD4-215ENST00000566843 UTS2RQ9UKP6 389 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 ATP11BQ9Y2G3 1177 aa15.45■□□□□ 0.06
COMMD4-215ENST00000566843 GNGT2O14610 69 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 ENPP3O14638 875 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 PRMT5O14744 637 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-215ENST00000566843 BCKDKO14874 412 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 GSTA4O15217 222 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 XPNPEP2O43895 674 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 NUAK1O60285 661 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 ANGPTL1O95841 491 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 SERPINB1P30740 379 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 ZNF157P51786 506 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-215ENST00000566843 MLLT6P55198 1093 aaPredicted RBP15.44■□□□□ 0.06
COMMD4-215ENST00000566843 CXCR4P61073 352 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 SLC35A2P78381 396 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 NPTX1Q15818 432 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 CATSPEREQ5SY80 951 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 CYP20A1Q6UW02 462 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 FAM126BQ8IXS8 530 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 OR4L1Q8NH43 312 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 CNIH3Q8TBE1 160 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 HMCESQ96FZ2 354 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 RTP3Q9BQQ7 232 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 C17orf80Q9BSJ5 609 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 HOXD1Q9GZZ0 328 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 DSN1Q9H410 356 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 SPC25Q9HBM1 224 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 ABCC13Q9NSE7 274 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP15.44■□□□□ 0.06
COMMD4-215ENST00000566843 GALPQ9UBC7 116 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 CACNG4Q9UBN1 327 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 OSGIN1Q9UJX0 560 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 RBMX2Q9Y388 322 aaKnown RBP15.44■□□□□ 0.06
COMMD4-215ENST00000566843 TPRKBQ9Y3C4 175 aa15.44■□□□□ 0.06
COMMD4-215ENST00000566843 DFNA5O60443 496 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MRPS14O60783 128 aaKnown RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 OR4F21O95013 312 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 MSH3P20585 1137 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 FSHRP23945 695 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 PCSK1P29120 753 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 ALDH7A1P49419 539 aaKnown RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 FADDQ13158 208 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 RAPSNQ13702 412 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 PTPRCAPQ14761 206 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 ATAD3BQ5T9A4 648 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 THOC7Q6I9Y2 204 aaKnown RBP15.43■□□□□ 0.06
COMMD4-215ENST00000566843 FAM171BQ6P995 826 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 B3GNT8Q7Z7M8 397 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 SAPCD2Q86UD0 394 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 HIPK1Q86Z02 1210 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 ARL10Q8N8L6 244 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 SETD9Q8NE22 299 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 CHAC2Q8WUX2 184 aa15.43■□□□□ 0.06
COMMD4-215ENST00000566843 C1orf74Q96LT6 269 aa15.43■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms