RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, human

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HERPUD1-210	ENST00000565966	ERP44	Q9BS26	406 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	SEMA6C	Q9H3T2	930 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	EPB41L1	Q9H4G0	881 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	VPS37B	Q9H9H4	285 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	SLC40A1	Q9NP59	571 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CATSPERZ	Q9NTU4	200 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	WDR37	Q9Y2I8	494 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	MRFAP1	Q9Y605	127 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	MAD1L1	Q9Y6D9	718 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PRSS21	Q9Y6M0	314 aa		13.55	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ADAMTS20	P59510	1910 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	OR52A4P	A6NMU1	304 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	SMAP	O00193	183 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	QSOX1	O00391	747 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PLD2	O14939	933 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CD3EAP	O15446	510 aa	Known RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	TLX3	O43711	291 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	OR1I1	O60431	355 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	AP2A2	O94973	939 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	HOXB3	P14651	431 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PPARG	P37231	505 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	MLLT3	P42568	568 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ERVPABLB-1	P60509	514 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CFHR1	Q03591	330 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	DHX9	Q08211	1270 aa	Known RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	TRA2A	Q13595	282 aa	Known RBP eCLIP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	MSS51	Q4VC12	460 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	DUPD1	Q68J44	220 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	WDR74	Q6RFH5	385 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	LDB1	Q86U70	411 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CFAP206	Q8IYR0	622 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	KIF18A	Q8NI77	898 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	HM13	Q8TCT9	377 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ZNF669	Q96BR6	464 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	STAMBPL1	Q96FJ0	436 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PWWP2A	Q96N64	755 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CMKLR1	Q99788	373 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CCM2	Q9BSQ5	444 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	TBC1D10A	Q9BXI6	508 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ASCL3	Q9NQ33	180 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	THSD1	Q9NS62	852 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	AKAP7	Q9P0M2	348 aa	Predicted RBP	13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ANAPC5	Q9UJX4	755 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PSMD13	Q9UNM6	376 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	RAX	Q9Y2V3	346 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	RPS6KL1	Q9Y6S9	549 aa		13.54	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CELSR3	Q9NYQ7	3312 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	IGHV5-10-1	A0A0J9YXX1	117 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ZCWPW2	A0A1B0GU75	182 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	GOLGA8K	D6RF30	607 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	GOLGA8T	H3BQL2	631 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	HGS	O14964	777 aa	Predicted RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	BANF1	O75531	89 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	USP1	O94782	785 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	TNFSF15	O95150	251 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	GSTM1	P09488	218 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	JMJD7	P0C870	316 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	CSF2RB	P32927	897 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	GSTM4	Q03013	218 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	TUBB2A	Q13885	445 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	RPE65	Q16518	533 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	BBS9	Q3SYG4	887 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ZNF658B	Q4V348	819 aa	Predicted RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	DNAJC21	Q5F1R6	531 aa	Known RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	AARS2	Q5JTZ9	985 aa	Known RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	LILRA3	Q8N6C8	439 aa	Predicted RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	SNIP1	Q8TAD8	396 aa	Known RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	NCSTN	Q92542	709 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	EBNA1BP2	Q99848	306 aa	Known RBP	13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	TUBB2B	Q9BVA1	445 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	ZMYND15	Q9H091	742 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	WWP1	Q9H0M0	922 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	DPH5	Q9H2P9	285 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PDP2	Q9P2J9	529 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	FAM8A1	Q9UBU6	413 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	LOXL2	Q9Y4K0	774 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	LAMA5	O15230	3695 aa		13.53	□□□□□ -0.24
HERPUD1-210	ENST00000565966	AHCTF1	Q8WYP5	2266 aa		13.52	□□□□□ -0.24
HERPUD1-210	ENST00000565966	PRAMEF33	A0A0G2JMD5	474 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	CDRT15L2	A8MXV6	281 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966		F8W8V4	182 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	UBXN7	O94888	489 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	POLB	P06746	335 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	ITGA2B	P08514	1039 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	THRA	P10827	490 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	AMD1	P17707	334 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	PGAM1	P18669	254 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	PAM	P19021	973 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	EIF2S3	P41091	472 aa	Known RBP	13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	MAPK9	P45984	424 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	TTPA	P49638	278 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	GPR18	Q14330	331 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	C16orf72	Q14CZ0	275 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	MRNIP	Q6NTE8	343 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	ZNF449	Q6P9G9	518 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	PLXDC1	Q8IUK5	500 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	IGDCC3	Q8IVU1	814 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	PDIK1L	Q8N165	341 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	BBOF1	Q8ND07	529 aa		13.52	□□□□□ -0.25
HERPUD1-210	ENST00000565966	RCBTB1	Q8NDN9	531 aa		13.52	□□□□□ -0.25

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