RNA–Protein interactions for RNA: ENST00000565023.1

VPS9D1-204, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 5

Gene VPS9D1, Length 775 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-204ENST00000565023 NLE1Q9NVX2 485 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ZDHHC3Q9NYG2 299 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 PAK5Q9P286 719 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 SAR1BQ9Y6B6 198 aa13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 DNMT3AQ9Y6K1 912 aaPredicted RBP13.34□□□□□ -0.27
VPS9D1-204ENST00000565023 ERI2A8K979 691 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 CYSRT1A8MQ03 144 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 B4E171 279 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 STMND1H3BQB6 276 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 ATXN7O15265 892 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 SGTAO43765 313 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 GAS8O95995 478 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 SLC35G4P0C7Q5 338 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 MTHFD1P11586 935 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 ATP1B2P14415 290 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 RPL22P35268 128 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 TSPAN7P41732 249 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 ARCN1P48444 511 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 ATP1A2P50993 1020 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 ETF1P62495 437 aaKnown RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 SH3BP2P78314 561 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 CDH17Q12864 832 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 SEMA5AQ13591 1074 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 LY6DQ14210 128 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 KRT33BQ14525 404 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 CACHD1Q5VU97 1274 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 METRNLQ641Q3 311 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 TTC27Q6P3X3 843 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 C4orf22Q6V702 233 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 LINC00523Q86TU6 105 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 CREG2Q8IUH2 290 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 OR2L2Q8NH16 312 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 STYXQ8WUJ0 223 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 RMDN2Q96LZ7 410 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 UCK1Q9HA47 277 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 PDP2Q9P2J9 529 aa13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 MN1Q10571 1320 aaPredicted RBP13.33□□□□□ -0.28
VPS9D1-204ENST00000565023 RAD1O60671 282 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 PHF2O75151 1096 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 SUN1O94901 812 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 C9P02748 559 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 APRTP07741 180 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 WT1P19544 449 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 ACRV1P26436 265 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 CD82P27701 267 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 COILP38432 576 aaPredicted RBP13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 CAPZBP47756 277 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 PRLHRP49683 370 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 RAB15P59190 212 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 CYP4F2P78329 520 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 MC2RQ01718 297 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 RHDQ02161 417 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 BRD3Q15059 726 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 DBN1Q16643 649 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 BCL7AQ4VC05 210 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 GSTA5Q7RTV2 222 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 DTX1Q86Y01 620 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 RBM12BQ8IXT5 1001 aaKnown RBP13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 PIANPQ8IYJ0 282 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 CACNA2D3Q8IZS8 1091 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 CLDN19Q8N6F1 224 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 BMPERQ8N8U9 685 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 HM13Q8TCT9 377 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 DDA1Q9BW61 102 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 ASPSCR1Q9BZE9 553 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 SLC2A6Q9UGQ3 507 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 PCDHGA3Q9Y5H0 932 aa13.32□□□□□ -0.28
VPS9D1-204ENST00000565023 GOLGA6L10A0A0M3HER8 536 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 CCDC162PA2VCL2 907 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 AGAP14A8MT82 685 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 POLR1CO15160 346 aaPredicted RBP13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 FNTAP49354 379 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 BASP1P80723 227 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 CACNG1Q06432 222 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 SKIDA1Q1XH10 827 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 GPR33Q49SQ1 333 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 CCDC137Q6PK04 289 aaKnown RBP13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 PCSK4Q6UW60 755 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 CEACAM20Q6UY09 585 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 NAPRTQ6XQN6 538 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 UNC5BQ8IZJ1 945 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 ZSCAN1Q8NBB4 408 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 HEXDCQ8WVB3 486 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 NKD1Q969G9 470 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 HDAC10Q969S8 669 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 ZDHHC12Q96GR4 267 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 OR6C1Q96RD1 312 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 FERD3LQ96RJ6 166 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 ACSL5Q9ULC5 683 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 SSUH2Q9Y2M2 353 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 NEU2Q9Y3R4 380 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 PRSS21Q9Y6M0 314 aa13.31□□□□□ -0.28
VPS9D1-204ENST00000565023 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 TRBV5-4A0A0C4DH59 114 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 OR6C74A6NCV1 312 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 H7C0S8 307 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 ERVH48-1M5A8F1 160 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 STK17BO94768 372 aa13.3□□□□□ -0.28
VPS9D1-204ENST00000565023 LIFP15018 202 aa13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 57.8 ms