RNA–Protein interactions for RNA: ENST00000563842.5

CLK3-213, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 860 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-213ENST00000563842 TOX3O15405 576 aaPredicted RBP13.1□□□□□ -0.31
CLK3-213ENST00000563842 POLBP06746 335 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 MLNP12872 115 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 PAMP19021 973 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 CD82P27701 267 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 PAFAH1B1P43034 410 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 TTPAP49638 278 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 MAPK10P53779 464 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 KCNJ11Q14654 390 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 PPP1R7Q15435 360 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 PAPD7Q5XG87 772 aaKnown RBP13.1□□□□□ -0.31
CLK3-213ENST00000563842 RCBTB1Q8NDN9 531 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 HNRNPLLQ8WVV9 542 aaKnown RBP13.1□□□□□ -0.31
CLK3-213ENST00000563842 ZDHHC12Q96GR4 267 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 ZNF778Q96MU6 729 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 RUNDC3BQ96NL0 473 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 TAAR9Q96RI9 348 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 RAB33BQ9H082 229 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 XAB2Q9HCS7 855 aaKnown RBP13.1□□□□□ -0.31
CLK3-213ENST00000563842 CATSPERZQ9NTU4 200 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 SAMD15Q9P1V8 674 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 RNF14Q9UBS8 474 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 FAM8A1Q9UBU6 413 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 SLC2A6Q9UGQ3 507 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 ACSL6Q9UKU0 697 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 PYCARDQ9ULZ3 195 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 SAR1BQ9Y6B6 198 aa13.1□□□□□ -0.31
CLK3-213ENST00000563842 MN1Q10571 1320 aaPredicted RBP13.1□□□□□ -0.31
CLK3-213ENST00000563842 B4E171 279 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 C9P02748 559 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 PRSS56P0CW18 603 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 HGFP14210 728 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 TYRP1P17643 537 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 ITIH1P19827 911 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 MPSTP25325 297 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 MGAT1P26572 445 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 SLC5A2P31639 672 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 TSPAN7P41732 249 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 CD151P48509 253 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 UCNP55089 124 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 RAB15P59190 212 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 PLCL1Q15111 1095 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 SNAP47Q5SQN1 464 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 CAPRIN2Q6IMN6 1127 aaKnown RBP13.09□□□□□ -0.31
CLK3-213ENST00000563842 ARHGAP22Q7Z5H3 698 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 PCGF5Q86SE9 256 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 MPP5Q8N3R9 675 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 CLDN19Q8N6F1 224 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 MCUQ8NE86 351 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 INSM2Q96T92 566 aaPredicted RBP13.09□□□□□ -0.31
CLK3-213ENST00000563842 KIFC1Q9BW19 673 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 ASPSCR1Q9BZE9 553 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 COG4Q9H9E3 785 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 TREX1Q9NSU2 369 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 TMEM9Q9P0T7 183 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 EPHA6Q9UF33 1036 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 SOX13Q9UN79 622 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 NEU2Q9Y3R4 380 aa13.09□□□□□ -0.31
CLK3-213ENST00000563842 DSPP15924 2871 aaKnown RBP13.09□□□□□ -0.31
CLK3-213ENST00000563842 UNC79Q9P2D8 2635 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 TCRBV7S3A2A0A539 114 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 SDR42E2A6NKP2 422 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 A8MU76 341 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CD3EAPO15446 510 aaKnown RBP13.08□□□□□ -0.32
CLK3-213ENST00000563842 CAPN5O15484 640 aaPredicted RBP13.08□□□□□ -0.32
CLK3-213ENST00000563842 ANKRD34CP0C6C1 535 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CAPZBP47756 277 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 TERF1P54274 439 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CRADDP78560 199 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 MRNIPQ6NTE8 343 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CASC4Q6P4E1 433 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CYB5D1Q6P9G0 228 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 ZNF534Q76KX8 674 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 SDCCAG8Q86SQ7 713 aaPredicted RBP13.08□□□□□ -0.32
CLK3-213ENST00000563842 FAM129CQ86XR2 697 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 SPACA3Q8IXA5 215 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 PPIL6Q8IXY8 311 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 GPR150Q8NGU9 434 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 NAT14Q8WUY8 206 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CPT1BQ92523 772 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 ELMO1Q92556 727 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 SLCO2A1Q92959 643 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 USP7Q93009 1102 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 NAF1Q96HR8 494 aaKnown RBP13.08□□□□□ -0.32
CLK3-213ENST00000563842 C9orf72Q96LT7 481 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 TEFMQ96QE5 360 aaKnown RBP13.08□□□□□ -0.32
CLK3-213ENST00000563842 KIR3DX1Q9H7L2 352 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 KCND1Q9NSA2 647 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 SYBUQ9NX95 663 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 SLC39A1Q9NY26 324 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 OGFRQ9NZT2 677 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 KLHL3Q9UH77 587 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 PCYOX1Q9UHG3 505 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 PCDHB11Q9Y5F2 797 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 PCDHGA3Q9Y5H0 932 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 CFAP20Q9Y6A4 193 aaKnown RBP13.08□□□□□ -0.32
CLK3-213ENST00000563842 SDK2Q58EX2 2172 aa13.08□□□□□ -0.32
CLK3-213ENST00000563842 ZZEF1O43149 2961 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 PCM1Q15154 2024 aa13.07□□□□□ -0.32
CLK3-213ENST00000563842 PMS2P1A4D2B8 440 aa13.07□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms