RNA–Protein interactions for RNA: ENST00000563343.5

HERPUD1-206, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 4

Gene HERPUD1, Length 567 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-206ENST00000563343 SLC6A20Q9NP91 592 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 NT5MQ9NPB1 228 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 ETNK2Q9NVF9 386 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 HRASLS2Q9NWW9 162 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 ADAM22Q9P0K1 906 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 NFKBIL1Q9UBC1 381 aaPredicted RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 TRIM10Q9UDY6 481 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 DNPEPQ9ULA0 475 aa7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 PTRH2Q9Y3E5 179 aaKnown RBP7.5□□□□□ -1.21
HERPUD1-206ENST00000563343 TRGV8A0A0C4DH27 118 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 C1orf232A0A0U1RR37 186 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 SLC9B1P1A6NJY1 282 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 TMEM200CA6NKL6 621 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 TMEM150CB9EJG8 249 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 C9J4A7 227 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 BIN1O00499 593 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 ZNF749O43361 778 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 CBSLP0DN79 551 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 DRD2P14416 443 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 CYP2A7P20853 494 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 MST1P26927 711 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 CBSP35520 551 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 FOLR3P41439 243 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 DCDC1P59894 354 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 DSC2Q02487 901 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 ADCY2Q08462 1091 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 DMPKQ09013 629 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 PRKD1Q15139 912 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 MAN2A1Q16706 1144 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 QPCTQ16769 361 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 ZNF569Q5MCW4 686 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 TMTC4Q5T4D3 741 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 ERMARDQ5T6L9 678 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 MARC1Q5VT66 337 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 AGAP7PQ5VUJ5 663 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 PRAMEF13Q5VWM6 474 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 MLIPQ5VWP3 458 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 MTFR2Q6P444 385 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 GFRALQ6UXV0 394 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 FAM83HQ6ZRV2 1179 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 B4GALNT4Q76KP1 1039 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 OOSP2Q86WS3 158 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 CREBRFQ8IUR6 639 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 CEP97Q8IW35 865 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 TTC30BQ8N4P2 665 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 ARRDC2Q8TBH0 407 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 CNDP1Q96KN2 507 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 AGAP4Q96P64 663 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 GBP5Q96PP8 586 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 MDFIQ99750 246 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 NUP85Q9BW27 656 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 STK33Q9BYT3 514 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 NDST4Q9H3R1 872 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 SYTL2Q9HCH5 934 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 C1GALT1Q9NS00 363 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 SEMA3GQ9NS98 782 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 SOHLH2Q9NX45 425 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 PKD2L2Q9NZM6 624 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 TNFRSF10DQ9UBN6 386 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 POMT2Q9UKY4 750 aa7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 RPH3AQ9Y2J0 694 aaPredicted RBP7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 INTS1Q8N201 2190 aaKnown RBP7.49□□□□□ -1.21
HERPUD1-206ENST00000563343 FBN1P35555 2871 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CCDC66A2RUB6 948 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 OR6C74A6NCV1 312 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 SOCS6O14544 535 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 DAPK3O43293 454 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 WISP2O76076 250 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 GFPT2O94808 682 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 KLHL18O94889 574 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CLDN14O95500 239 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CALB1P05937 261 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 MTHFD1P11586 935 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 ST6GAL1P15907 406 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 KLK2P20151 261 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 AGXTP21549 392 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 HALP42357 657 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 GABRA4P48169 554 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 EPHB1P54762 984 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CDH6P55285 790 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 JAM2P57087 298 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 RPL26P61254 145 aaKnown RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CSNK1G2P78368 415 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 NIPAL4Q0D2K0 466 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 GALNT3Q14435 633 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CAMK4Q16566 473 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CLEC16AQ2KHT3 1053 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 ANKRD20A8PQ5CZ79 823 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 PPP6R3Q5H9R7 873 aaPredicted RBP7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 ZFYVE27Q5T4F4 411 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 PDPK2PQ6A1A2 396 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 DNAJC24Q6P3W2 148 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 TMEM207Q6UWW9 146 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 BBS5Q8N3I7 341 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 TRAM1L1Q8N609 369 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 LPCAT1Q8NF37 534 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 ADAMTS18Q8TE60 1221 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 CHTF18Q8WVB6 975 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 MAML1Q92585 1016 aa7.48□□□□□ -1.21
HERPUD1-206ENST00000563343 PTERQ96BW5 349 aa7.48□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 64 ms