RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 MEP1AQ16819 746 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 CRY2Q49AN0 593 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 MPP7Q5T2T1 576 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 C18orf63Q68DL7 685 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ZBTB49Q6ZSB9 765 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 INTS8Q75QN2 995 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ADIPOR2Q86V24 386 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 MCEMP1Q8IX19 187 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ZNF34Q8IZ26 560 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 C1orf87Q8N0U7 546 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 NUP93Q8N1F7 819 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 XXYLT1Q8NBI6 393 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 SLC38A9Q8NBW4 561 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ACVR1CQ8NER5 493 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 TBC1D16Q8TBP0 767 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 KCNE4Q8WWG9 221 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 DNAAF4Q8WXU2 420 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ABTB1Q969K4 478 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 CCDC114Q96M63 670 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 QRFPRQ96P65 431 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 DUX5Q96PT3 197 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 PCYT2Q99447 389 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 MTERF1Q99551 399 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 SEMA3CQ99985 751 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 MRPL1Q9BYD6 325 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 PPIL3Q9H2H8 161 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 KCNK15Q9H427 330 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 EBF2Q9HAK2 575 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 TRMT1Q9NXH9 659 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 GDE1Q9NZC3 331 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 DNAJB4Q9UDY4 337 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 TSPYL4Q9UJ04 414 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 TUBE1Q9UJT0 475 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 DBNLQ9UJU6 430 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 KCNK7Q9Y2U2 307 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 AMDHD2Q9Y303 409 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 ZFP37Q9Y6Q3 630 aaPredicted RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 PTPRCP08575 1304 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 CGNL1Q0VF96 1302 aa3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 PDS5AQ29RF7 1337 aaKnown RBP3.16□□□□□ -1.9
SHCBP1-202ENST00000563219 J3QR06 171 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 PLK4O00444 970 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 MEIS2O14770 477 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 GH2P01242 217 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 FYNP06241 537 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 OR52Z1P0C646 297 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 CYP11B2P19099 503 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 CORO1AP31146 461 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 USP8P40818 1118 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 TMPOP42166 694 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 CRKLP46109 303 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 RAB28P51157 221 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 ARSEP51690 589 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 CAPZA1P52907 286 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 KRT83P78385 493 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC20A2Q08357 652 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 SYT16Q17RD7 645 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 HYAL4Q2M3T9 481 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF674Q2M3X9 581 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 KRTCAP3Q53RY4 240 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 DHRS7BQ6IAN0 325 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 PRSS57Q6UWY2 283 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 GFRALQ6UXV0 394 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 RBPMS2Q6ZRY4 209 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 ATG9AQ7Z3C6 839 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 ADCK2Q7Z695 626 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 SATL1Q86VE3 508 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM173Q86WV6 379 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 RNF113BQ8IZP6 322 aaKnown RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 ARL10Q8N8L6 244 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 IQUBQ8NA54 791 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 OR5R1Q8NH85 324 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 LNX1Q8TBB1 728 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 DEPDC1BQ8WUY9 529 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 HDAC11Q96DB2 347 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM19Q96HH6 336 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 DACH2Q96NX9 599 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 RAB3IPQ96QF0 476 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 INTS14Q96SY0 518 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 GPR88Q9GZN0 384 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 MMADHCQ9H3L0 296 aaPredicted RBP3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 SLC24A2Q9UI40 661 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 OSGIN1Q9UJX0 560 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 FBXL2Q9UKC9 423 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 RNF150Q9ULK6 438 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 VDAC3Q9Y277 283 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 KLHL20Q9Y2M5 609 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 PCDHAC2Q9Y5I4 1007 aa3.15□□□□□ -1.91
SHCBP1-202ENST00000563219 IGHV4OR15-8A0A075B7B6 117 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 A0A0U1RQK1 487 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 A0A1W2PP11 408 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TCRBV21S2A2A0A5A6 115 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF320A2RRD8 509 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 A4D1N5 150 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 TMEM8BA6NDV4 472 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 IFITM10A6NMD0 228 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 HNRNPCL2B2RXH8 293 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 ZNF217O75362 1048 aa3.14□□□□□ -1.91
SHCBP1-202ENST00000563219 CREG1O75629 220 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms