RNA–Protein interactions for RNA: ENST00000561976.5

VPS9D1-202, Transcript of VPS9 domain containing 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,791 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-202ENST00000561976 SLC1A7O00341 560 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 E2F3O00716 465 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 KDM1AO60341 852 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 TBX18O95935 607 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 CPT1AP50416 773 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 IL2P60568 153 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 LSM3P62310 102 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 SERINC3Q13530 473 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 NKG7Q16617 165 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 DDR2Q16832 855 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 AP5B1Q2VPB7 878 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 SLC39A12Q504Y0 691 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 AFTPHQ6ULP2 937 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 DNAJC14Q6Y2X3 702 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 GLT6D1Q7Z4J2 308 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 MON1AQ86VX9 555 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 NCLNQ969V3 563 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 MROQ9BYG7 248 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 HEBP1Q9NRV9 189 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 NLE1Q9NVX2 485 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF99A8MXY4 864 aaPredicted RBP13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ARNTLO00327 626 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 CNOT3O75175 753 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 UGT2B11O75310 529 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 NDST3O95803 873 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 EPOP01588 193 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ITGB1P05556 798 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 GP2P55259 537 aaKnown RBP13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 PPP2R2BQ00005 443 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ANKRD13BQ86YJ7 626 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 EID3Q8N140 333 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 SVOPLQ8N434 492 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 GLMNQ92990 594 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF382Q96SR6 550 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 AP5M1Q9H0R1 490 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ACTL8Q9H568 366 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 MAGEE1Q9HCI5 957 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 C3orf18Q9UK00 162 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 SPO11Q9Y5K1 396 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 ORC6Q9Y5N6 252 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 U3KQV3 271 aa13.77□□□□□ -0.21
VPS9D1-202ENST00000561976 COL4A4P53420 1690 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 FAM92AA1XBS5 289 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 E5RI56 91 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 F8W810 466 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 KLK8O60259 260 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 OR1I1O60431 355 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 PRKD3O94806 890 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ALDH2P05091 517 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 CNPP09543 421 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 PKMP14618 531 aaKnown RBP13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 SLC2A4P14672 509 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ALDH4A1P30038 563 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 IL5RAQ01344 420 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 CTF1Q16619 201 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 OR8J3Q8NGG0 315 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ZFP90Q8TF47 636 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 FRS2Q8WU20 508 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ZBTB18Q99592 522 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 HEPHQ9BQS7 1158 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 GORASP2Q9H8Y8 452 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 TMEM45AQ9NWC5 275 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 TRPV2Q9Y5S1 764 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ACTL7AQ9Y615 435 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 CCL15-CCL14A0A0B4J2E2 113 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 XPNPEP2O43895 674 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ITIH1P19827 911 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 GPR15P49685 360 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 KPNA1P52294 538 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 CYP4F3Q08477 520 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 CCL15Q16663 113 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 C18orf21Q32NC0 220 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 PARP15Q460N3 678 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 RFTN2Q52LD8 501 aaPredicted RBP13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ADHFE1Q8IWW8 467 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 S100ZQ8WXG8 99 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 KATNAL1Q9BW62 490 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 ZMYM5Q9UJ78 669 aa13.76□□□□□ -0.21
VPS9D1-202ENST00000561976 NADKO95544 446 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ZNF140P52738 457 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 RPS3AP61247 264 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ISL1P61371 349 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 RPL38P63173 70 aaKnown RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 IL1RL1Q01638 556 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 PAGE2BQ5JRK9 111 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ADCK1Q86TW2 530 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 NLGN2Q8NFZ4 835 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 PJA1Q8NG27 643 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 CNIH3Q8TBE1 160 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 SLC13A3Q8WWT9 602 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 RORBQ92753 470 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 BTN2A3PQ96KV6 586 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 SMIM14Q96QK8 99 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 PCDH12Q9NPG4 1184 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 PAK1IP1Q9NWT1 392 aaPredicted RBP13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 ELOVL7A1L3X0 281 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 HTR3EA5X5Y0 456 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 C2orf81A6NN90 581 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 M0QZQ0 153 aa13.75□□□□□ -0.21
VPS9D1-202ENST00000561976 IFRD1O00458 451 aaPredicted RBP13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms