RNA–Protein interactions for RNA: ENST00000561436.1

HERC1-215, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 1, humanhuman

TSL 4

Gene HERC1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC1-215ENST00000561436 MTSS1LQ765P7 747 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 TAOK1Q7L7X3 1001 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 GALNT5Q7Z7M9 940 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 ZC3HC1Q86WB0 502 aaKnown RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 DNAAF5Q86Y56 855 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 FOXP4Q8IVH2 680 aaPredicted RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 MCEMP1Q8IX19 187 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 AADATQ8N5Z0 425 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 LSMEM1Q8N8F7 131 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 POMGNT2Q8NAT1 580 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CSNK2A3Q8NEV1 391 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PRPF31Q8WWY3 499 aaKnown RBP3.72□□□□□ -1.81
HERC1-215ENST00000561436 IGSF8Q969P0 613 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 MTBPQ96DY7 904 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 OR2A14Q96R47 310 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 SEZ6LQ9BYH1 1024 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 DCLK3Q9C098 648 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 HRH4Q9H3N8 390 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PPP1R3EQ9H7J1 279 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 C17orf75Q9HAS0 396 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 CNGB3Q9NQW8 809 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PLSCR4Q9NRQ2 329 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 SETD4Q9NVD3 440 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 ARHGEF38Q9NXL2 777 aa3.72□□□□□ -1.81
HERC1-215ENST00000561436 PTPRCP08575 1304 aa3.71□□□□□ -1.81
HERC1-215ENST00000561436 GPR75-ASB3A0A0A6YYF3 556 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 C1orf226A1L170 272 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 SLC15A5A6NIM6 579 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 CD8B2A6NJW9 211 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 IFNL4K9M1U5 179 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 HS3ST1O14792 307 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 P4HA2O15460 535 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 HSPA12AO43301 675 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 ZIC3O60481 467 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 PLOD3O60568 738 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 MITFO75030 526 aaPredicted RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 ASNSP08243 561 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 ANXA7P20073 488 aaKnown RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 HNRNPH1P31943 449 aaKnown RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 ACSL1P33121 698 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 AMTP48728 403 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 STAT2P52630 851 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 PMS2P54278 862 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 BACE1P56817 501 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 MRPS5P82675 430 aaKnown RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 ECT2LQ008S8 904 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 BECN1Q14457 450 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 IRF3Q14653 427 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 CTF1Q16619 201 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 C2orf68Q2NKX9 166 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 DCST1Q5T197 706 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 SLC30A6Q6NXT4 461 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 ZNF549Q6P9A3 640 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 KRBA2Q6ZNG9 492 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 ANKRD13CQ8N6S4 541 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 OR8K5Q8NH50 307 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 MAGEC3Q8TD91 643 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 GUCD1Q96NT3 240 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 CDX2Q99626 313 aaPredicted RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 KIFC3Q9BVG8 833 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 APOL6Q9BWW8 343 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 EBF3Q9H4W6 596 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 MAGIXQ9H6Y5 334 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 MARCH4Q9P2E8 410 aaPredicted RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 STK39Q9UEW8 545 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 OR14J1Q9UGF5 321 aa3.71□□□□□ -1.82
HERC1-215ENST00000561436 SEC63Q9UGP8 760 aaKnown RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 EXO1Q9UQ84 846 aaKnown RBP3.71□□□□□ -1.82
HERC1-215ENST00000561436 HSFX4A0A1B0GTS1 333 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 HSFX3A0A1B0GWH4 333 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 GOLGA6L9A6NEM1 432 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GLOD5A6NK44 160 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 I6L893 689 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 MAP2K7O14733 419 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 TNFRSF13BO14836 293 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 TIMM23O14925 209 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 ATP2A1O14983 1001 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 IPO8O15397 1037 aaKnown RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 SPINT2O43291 252 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 RGS14O43566 566 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 AVILO75366 819 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GJB3O75712 270 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GAGE7O76087 117 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 SOX30O94993 753 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 CSPG5O95196 566 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 BAG3O95817 575 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 FTCDO95954 541 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 EGFP01133 1207 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 LCATP04180 440 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 CYC1P08574 325 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GAGE12FP0CL80 117 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GAGE12GP0CL81 117 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GAGE12IP0CL82 117 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 NR2F1P10589 423 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 G6PDP11413 515 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 HOXA11P31270 313 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 IL15P40933 162 aaPredicted RBP3.7□□□□□ -1.82
HERC1-215ENST00000561436 HTR6P50406 440 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 ARSEP51690 589 aa3.7□□□□□ -1.82
HERC1-215ENST00000561436 GPR143P51810 404 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms