RNA–Protein interactions for RNA: ENST00000561211.5

USP8-217, Transcript of ubiquitin specific peptidase 8, humanhuman

TSL 5

Gene USP8, Length 609 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP8-217ENST00000561211 C15orf59Q2T9L4 293 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 DPCR1Q3MIW9 517 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 KLHL22Q53GT1 634 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 TDRD12Q587J7 1177 aaKnown RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 CYP4A22Q5TCH4 519 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 KRTAP5-11Q6L8G4 156 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SLC25A24Q6NUK1 477 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 ZNF517Q6ZMY9 492 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 CFAP77Q6ZQR2 320 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 C15orf39Q6ZRI6 1047 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 LINGO2Q7L985 606 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SPATA19Q7Z5L4 167 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 FJX1Q86VR8 437 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 ZC3HC1Q86WB0 502 aaKnown RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 NBPF5PQ86XG9 351 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 CEP57Q86XR8 500 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 FOXRED2Q8IWF2 684 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SIX6OS1Q8N1H7 587 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 PGBD5Q8N414 524 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 RBM15BQ8NDT2 890 aaKnown RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 ANKRD20A12PQ8NF67 263 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 BEST2Q8NFU1 509 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 OR14A16Q8NHC5 309 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 OR14L1PQ8NHC6 308 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 RNF139Q8WU17 664 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 TMED6Q8WW62 240 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 BCL2L2Q92843 193 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 NEUROG1Q92886 237 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SMARCE1Q969G3 411 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 ZKSCAN4Q969J2 545 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 ZNF479Q96JC4 524 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SLC41A2Q96JW4 573 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 CEP295NLQ96MC4 621 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 MGME1Q9BQP7 344 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SRSF8Q9BRL6 282 aaKnown RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 ZPBPQ9BS86 351 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SLC25A33Q9BSK2 321 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 HAUS8Q9BT25 410 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 CACNG6Q9BXT2 260 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 ACPTQ9BZG2 426 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 SH2D4AQ9H788 454 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 FBRSL1Q9HCM7 1045 aaKnown RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 NOX4Q9NPH5 578 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 PFDN4Q9NQP4 134 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 POLE3Q9NRF9 147 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 OCIAD1Q9NX40 245 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 GDE1Q9NZC3 331 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 CRNNQ9UBG3 495 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 RCOR1Q9UKL0 485 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 CDC14AQ9UNH5 594 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 RPH3AQ9Y2J0 694 aaPredicted RBP3.35□□□□□ -1.87
USP8-217ENST00000561211 KIF3AQ9Y496 699 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 TRIM17Q9Y577 477 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 TEX264Q9Y6I9 313 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 STON1Q9Y6Q2 735 aa3.35□□□□□ -1.87
USP8-217ENST00000561211 hDV102S1A0JD36 115 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 C1orf226A1L170 272 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CLEC18AA5D8T8 446 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CCDC169A6NNP5 214 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CASQ2O14958 399 aaPredicted RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 SMAD6O43541 496 aaKnown RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 PEX11AO75192 247 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 NDUFS7O75251 213 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 SPAG6O75602 509 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CH25HO95992 272 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 IFNB1P01574 187 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 HMOX1P09601 288 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 SRCP12931 536 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 C21orf33P30042 268 aaPredicted RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 HNRNPH1P31943 449 aaKnown RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 FOXG1P55316 489 aaPredicted RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 TRA2BP62995 288 aaKnown RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 HMGN5P82970 282 aaKnown RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 BEX3Q00994 111 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 GRSF1Q12849 480 aaKnown RBP eCLIP3.34□□□□□ -1.87
USP8-217ENST00000561211 NEDD9Q14511 834 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CDONQ4KMG0 1287 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 FAM69BQ5VUD6 431 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 TMEM270Q6UE05 265 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 GBP6Q6ZN66 633 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 RGS9BPQ6ZS82 235 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 C1orf186Q6ZWK4 172 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 ADCK1Q86TW2 530 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 WDR63Q8IWG1 891 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 FBXL14Q8N1E6 418 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CLIP4Q8N3C7 705 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 SPATA6LQ8N4H0 392 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 TC2NQ8N9U0 490 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CLEC18CQ8NCF0 446 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 AGBL3Q8NEM8 1001 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 PTPMT1Q8WUK0 201 aaPredicted RBP3.34□□□□□ -1.87
USP8-217ENST00000561211 SLC13A3Q8WWT9 602 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 SLITRK1Q96PX8 696 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 FAM111AQ96PZ2 611 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 OR2A14Q96R47 310 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 INTS14Q96SY0 518 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 PKP4Q99569 1192 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 FAM110AQ9BQ89 295 aa3.34□□□□□ -1.87
USP8-217ENST00000561211 CCDC106Q9BWC9 280 aa3.34□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms