RNA–Protein interactions for RNA: ENST00000560909.2

ZEB1-220, Transcript of zinc finger E-box binding homeobox 1, humanhuman

TSL 4

Gene ZEB1, Length 564 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ZEB1-220ENST00000560909 VILLO15195 856 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PFDN6O15212 129 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SLC31A1O15431 190 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 GPR39O43194 453 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 NUAK1O60285 661 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 OR1I1O60431 355 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 KCNJ13O60928 360 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 DNAJC6O75061 913 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 GPC4O75487 556 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RFPL1O75677 317 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PIAS1O75925 651 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 FUCA1P04066 466 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CEACAM5P06731 702 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 IVLP07476 585 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ITGA2BP08514 1039 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SNRPAP09012 282 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 MYCLP1P12525 358 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ATP1B2P14415 290 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PKMP14618 531 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ZNF7P17097 686 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 FDXRP22570 491 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 AKT2P31751 481 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SPRP35270 261 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SLC26A3P40879 764 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 MSH2P43246 934 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 GPR1P46091 355 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RABIFP47224 123 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CD151P48509 253 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PRLHRP49683 370 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CLCNKAP51800 687 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RACK1P63244 317 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 MPP1Q00013 466 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 POU4F1Q01851 419 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 TMEM115Q12893 351 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 NFATC4Q14934 902 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 EFTUD2Q15029 972 aaKnown RBP eCLIP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ANGPT1Q15389 498 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ZRANB3Q5FWF4 1079 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CTSL3PQ5NE16 218 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CNSTQ6PJW8 725 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 TSSK4Q6SA08 328 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 LPCAT2Q7L5N7 544 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CCDC91Q7Z6B0 441 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 STRA8Q7Z7C7 330 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 C11orf96Q7Z7L8 435 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 LDB1Q86U70 411 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 HEATR4Q86WZ0 1026 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PHYKPLQ8IUZ5 450 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ZNF547Q8IVP9 402 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 OXR1Q8N573 874 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PNPLA1Q8N8W4 532 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RASGEF1AQ8N9B8 481 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ACVR1CQ8NER5 493 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 OR2W6PQ8NHA6 318 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 KCNJ9Q92806 393 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 TBRG4Q969Z0 631 aaKnown RBP eCLIP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 TLCD1Q96CP7 247 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 MTBPQ96DY7 904 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CCDC97Q96F63 343 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PDLIM5Q96HC4 596 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 LOXL4Q96JB6 756 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 VPS39Q96JC1 886 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ZNF514Q96K75 400 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 TTC1Q99614 292 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PRRX2Q99811 253 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 BOCQ9BWV1 1114 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 LGR4Q9BXB1 951 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 C1QTNF1Q9BXJ1 281 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 FAM96AQ9H5X1 160 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 WDR26Q9H7D7 661 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RMI1Q9H9A7 625 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 POPDC3Q9HBV1 291 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PHPT1Q9NRX4 125 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SLC17A6Q9P2U8 582 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PSMC3IPQ9P2W1 217 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 ATXN10Q9UBB4 475 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 CD84Q9UIB8 345 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 GPR34Q9UPC5 381 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 FNDC3AQ9Y2H6 1198 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 MTO1Q9Y2Z2 717 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 VWA7Q9Y334 891 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SLCO1B1Q9Y6L6 691 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PRSS21Q9Y6M0 314 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 DGKBQ9Y6T7 804 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 EP300Q09472 2414 aaPredicted RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 RIF1Q5UIP0 2472 aaKnown RBP5.39□□□□□ -1.55
ZEB1-220ENST00000560909 FRYLO94915 3013 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 PLXNA2O75051 1894 aa5.39□□□□□ -1.55
ZEB1-220ENST00000560909 SCN8AQ9UQD0 1980 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 CCDC189A1A4V9 331 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 TMEM202A6NGA9 273 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 FAM47DPA6NHR8 397 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 A6NNZ2 444 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 EIF3FO00303 357 aaPredicted RBP5.38□□□□□ -1.55
ZEB1-220ENST00000560909 QSOX1O00391 747 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 NDUFS2O75306 463 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 NDUFS3O75489 264 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 KRT37O76014 449 aa5.38□□□□□ -1.55
ZEB1-220ENST00000560909 KRT38O76015 456 aa5.38□□□□□ -1.55
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms