RNA–Protein interactions for RNA: ENST00000560871.5

RABGGTA-219, Transcript of Rab geranylgeranyltransferase subunit alpha, humanhuman

TSL 5

Gene RABGGTA, Length 886 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RABGGTA-219ENST00000560871 KIF18AQ8NI77 898 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 HNRNPLLQ8WVV9 542 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 LPGAT1Q92604 370 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 LRRC39Q96DD0 335 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 GFM1Q96RP9 751 aaKnown RBP15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 TUBB2BQ9BVA1 445 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 OR52A5Q9H2C5 316 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 SYNDIG1Q9H7V2 258 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 UCK1Q9HA47 277 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 ACSL5Q9ULC5 683 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 PSMD13Q9UNM6 376 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 TEX264Q9Y6I9 313 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 FAM169AQ9Y6X4 670 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 PKD1L2Q7Z442 2459 aa15.17■□□□□ 0.02
RABGGTA-219ENST00000560871 TTC4O95801 387 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 CSF2RBP32927 897 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 ADARP55265 1226 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 ARL4CP56559 192 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 GPLD1P80108 840 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 RPA4Q13156 261 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 BIRC2Q13490 618 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 RPE65Q16518 533 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 LONRF1Q17RB8 773 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 SPANXN3Q5MJ09 141 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 CTSL3PQ5NE16 218 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 RNF187Q5TA31 235 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 NEPROQ6NW34 567 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 C8orf74Q6P047 294 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 UNC5BQ8IZJ1 945 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 OTUD6BQ8N6M0 293 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 SERBP1Q8NC51 408 aaKnown RBP eCLIP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 SPDYE1Q8NFV5 336 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 SNIP1Q8TAD8 396 aaKnown RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 SH3KBP1Q96B97 665 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 GRAMD1AQ96CP6 724 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 SLC38A3Q99624 504 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 NAT9Q9BTE0 207 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 TBC1D10AQ9BXI6 508 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 LDHAL6BQ9BYZ2 381 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 WWP1Q9H0M0 922 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 RAB17Q9H0T7 212 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 ATXN7L1Q9ULK2 861 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 CHMP2BQ9UQN3 213 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 ENTPD2Q9Y5L3 495 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 CHD6Q8TD26 2715 aa15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 ANKRD11Q6UB99 2663 aaPredicted RBP15.16■□□□□ 0.02
RABGGTA-219ENST00000560871 URB1O60287 2271 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 SLC5A10A0PJK1 596 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 BHMG1C9JSJ3 638 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 LIN7AO14910 233 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 NDUFS3O75489 264 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 VIPP01282 170 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 SLC35G4P0C7Q5 338 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 MTHFD1P11586 935 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CD1CP29017 333 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 ALDH4A1P30038 563 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 ELK3P41970 407 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 LSSP48449 732 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 EPHA4P54764 986 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CFHR1Q03591 330 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CALCOCO2Q13137 446 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 SQSTM1Q13501 440 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 FASTKD3Q14CZ7 662 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CLPPQ16740 277 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 ZNF789Q5FWF6 425 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 STEAP4Q687X5 459 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 ZNF470Q6ECI4 717 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 DUS1LQ6P1R4 473 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 ZDHHC24Q6UX98 284 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 TMEM26Q6ZUK4 368 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 B3GNT8Q7Z7M8 397 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 LRRC6Q86X45 466 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 SLITRK4Q8IW52 837 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 DENND6AQ8IWF6 608 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 TRIM48Q8IWZ4 208 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 RBM12BQ8IXT5 1001 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 LMNTD2Q8IXW0 634 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 LSMEM2Q8N112 164 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 MMGT1Q8N4V1 131 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 NOA1Q8NC60 698 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 SEC14L1Q92503 715 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 FGF11Q92914 225 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CXorf40BQ96DE9 158 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 C12orf66Q96MD2 445 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 BIRC8Q96P09 236 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 INSM2Q96T92 566 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 TCF12Q99081 682 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 NUDT22Q9BRQ3 303 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 LRRC1Q9BTT6 524 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CARD6Q9BX69 1037 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 POLR1BQ9H9Y6 1135 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 EPB41L5Q9HCM4 733 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 SLC40A1Q9NP59 571 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 C20orf96Q9NUD7 363 aaPredicted RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 KCNK4Q9NYG8 393 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 UTP11Q9Y3A2 253 aaKnown RBP15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 CFAP47Q6ZTR5 3102 aa15.15■□□□□ 0.02
RABGGTA-219ENST00000560871 APC2O95996 2303 aa15.14■□□□□ 0.01
RABGGTA-219ENST00000560871 ACACAQ13085 2346 aa15.14■□□□□ 0.01
RABGGTA-219ENST00000560871 DSPP15924 2871 aaKnown RBP15.14■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms