RNA–Protein interactions for RNA: ENST00000560715.5

TSPAN3-209, Transcript of tetraspanin 3, humanhuman

TSL 2

Gene TSPAN3, Length 2,892 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN3-209ENST00000560715 PKLRP30613 574 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ADRA1BP35368 520 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 MSX2P35548 267 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 DSTNP60981 165 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF846Q147U1 533 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 KIAA0930Q6ICG6 404 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 C8orf86Q6ZUL3 223 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 HAUS6Q7Z4H7 955 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC51AQ86UW1 340 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 DPP10Q8N608 796 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 DNAJC5GQ8N7S2 189 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 C1orf54Q8WWF1 131 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 SAT2Q96F10 170 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PAFAH2Q99487 392 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CLSTN3Q9BQT9 956 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 OR2B2Q9GZK3 357 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 NEK6Q9HC98 313 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 WDR6Q9NNW5 1121 aaKnown RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 STMN3Q9NZ72 180 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 TMEM9Q9P0T7 183 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PADI1Q9ULC6 663 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 LYVE1Q9Y5Y7 322 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 GAKO14976 1311 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 F2RL2O00254 374 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 POLR1CO15160 346 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 NMT2O60551 498 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 OR2C1O95371 312 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CER1O95813 267 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ARP10275 920 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 DLATP10515 647 aaKnown RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PRKACAP17612 351 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 COMTP21964 271 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ETV4P43268 484 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 BAG6P46379 1132 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CDH15P55291 814 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 RNF4P78317 190 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CDC42EP1Q00587 391 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 NFATC3Q12968 1075 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 PFKFB3Q16875 520 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 LRIT3Q3SXY7 679 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNT1Q5JUK3 1230 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 SLFN13Q68D06 897 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 SLFN12LQ6IEE8 588 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 KRT80Q6KB66 452 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ZC3H3Q8IXZ2 948 aaKnown RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 BLIDQ8IZY5 108 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF444Q8N0Y2 327 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 URGCPQ8TCY9 931 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CD101Q93033 1021 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 HS3ST6Q96QI5 342 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 CDK5RAP1Q96SZ6 601 aaKnown RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 KCNK16Q96T55 309 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 SYT11Q9BT88 431 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 OSBPL11Q9BXB4 747 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 NPLQ9BXD5 320 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 COA1Q9GZY4 146 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 C12orf65Q9H3J6 166 aaKnown RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 IL17RBQ9NRM6 502 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 IL20Q9NYY1 176 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 TIMM13Q9Y5L4 95 aaPredicted RBP6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 KIF13BQ9NQT8 1826 aa6.66□□□□□ -1.34
TSPAN3-209ENST00000560715 C22orf46C9J442 243 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 CLDN25C9JDP6 229 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ATP2A1O14983 1001 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 FAM189A1O60320 539 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 SPAG6O75602 509 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 SEC24DO94855 1032 aaPredicted RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ARHGEF15O94989 841 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 AKR7A3O95154 331 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 CBX7O95931 251 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 CYC1P08574 325 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 MCF2P10911 925 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 KRT3P12035 628 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF182P17025 639 aaPredicted RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 NUDT1P36639 197 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ARL1P40616 181 aaPredicted RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC11A2P49281 568 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 SLC26A2P50443 739 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 STARD6P59095 220 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 TRAF2Q12933 501 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 PDIA2Q13087 525 aaKnown RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 PLD1Q13393 1074 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 TFDP1Q14186 410 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 STK11Q15831 433 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 TAZQ16635 292 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 PRICKLE4Q2TBC4 344 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 MFSD14BQ5SR56 506 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 C6orf10Q5SRN2 563 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 GPR107Q5VW38 600 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ABHD15Q6UXT9 468 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 GADL1Q6ZQY3 521 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 DSG4Q86SJ6 1040 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ADAMTSL2Q86TH1 951 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 CDH26Q8IXH8 852 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ASCC1Q8N9N2 400 aaKnown RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 GTPBP3Q969Y2 492 aaKnown RBP6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 RAB7BQ96AH8 199 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 CHFRQ96EP1 664 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 ZNF597Q96LX8 424 aa6.65□□□□□ -1.34
TSPAN3-209ENST00000560715 FAM20AQ96MK3 541 aa6.65□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms