RNA–Protein interactions for RNA: ENST00000559844.5

SNX1-208, Transcript of sorting nexin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNX1, Length 1,971 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-208ENST00000559844 ULK4Q96C45 1275 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 PANX3Q96QZ0 392 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 SERPINI1Q99574 410 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 EFCAB1Q9HAE3 211 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 C15orf41Q9Y2V0 281 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 EDDM13A0A1B0GTR0 161 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 LRRC14BA6NHZ5 514 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 AIM2O14862 343 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 VPS4BO75351 444 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 S100BP04271 92 aaPredicted RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 UGT2B4P06133 528 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 DGKAP23743 735 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 IRX1P78414 480 aaPredicted RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 RCN1Q15293 331 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 CWF19L1Q69YN2 538 aaKnown RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 BRAT1Q6PJG6 821 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 FRA10AC1Q70Z53 315 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 LARP4Q71RC2 724 aaKnown RBP eCLIP17.51■□□□□ 0.39
SNX1-208ENST00000559844 MYO1HQ8N1T3 1032 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 TWIST2Q8WVJ9 160 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 MARK4Q96L34 752 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 NSUN5Q96P11 429 aaKnown RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 PLEKHG4BQ96PX9 1271 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 NUSAP1Q9BXS6 441 aaKnown RBP17.51■□□□□ 0.39
SNX1-208ENST00000559844 PFDN4Q9NQP4 134 aa17.51■□□□□ 0.39
SNX1-208ENST00000559844 FKBP6O75344 327 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 CRCPO75575 148 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 KRT36O76013 467 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 DCNP07585 359 aaKnown RBP17.5■□□□□ 0.39
SNX1-208ENST00000559844 CYP2A6P11509 494 aaPredicted RBP17.5■□□□□ 0.39
SNX1-208ENST00000559844 HOXB2P14652 356 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 UGT1A6P19224 532 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 UGT1A1P22309 533 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 UGT1A4P22310 534 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 UGT1A3P35503 534 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 UGT1A5P35504 534 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 GCKP35557 465 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 TGFBIQ15582 683 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 SUPV3L1Q8IYB8 786 aaKnown RBP eCLIP17.5■□□□□ 0.39
SNX1-208ENST00000559844 FBXW8Q8N3Y1 598 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 GPR26Q8NDV2 337 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 OR56A4Q8NGH8 313 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 OR2A12Q8NGT7 310 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 PBXIP1Q96AQ6 731 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 CLDN23Q96B33 292 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 GABRG3Q99928 467 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 HEPHQ9BQS7 1158 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 BOCQ9BWV1 1114 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 ZDHHC3Q9NYG2 299 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 STX18Q9P2W9 335 aaKnown RBP17.5■□□□□ 0.39
SNX1-208ENST00000559844 SUN2Q9UH99 717 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 PCTPQ9UKL6 214 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 TNPO3Q9Y5L0 923 aaKnown RBP17.5■□□□□ 0.39
SNX1-208ENST00000559844 DNAJC15Q9Y5T4 150 aa17.5■□□□□ 0.39
SNX1-208ENST00000559844 NCF1BA6NI72 391 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 NCF1CA8MVU1 366 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 A8MX80 341 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 GIPC1O14908 333 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 RAD51BO15315 384 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 SYNCRIPO60506 623 aaKnown RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 SLC25A14O95258 325 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 NCF1P14598 390 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 NSG1P42857 185 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 STX1BP61266 288 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 PTSQ03393 145 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 SLC34A1Q06495 639 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 ART3Q13508 389 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 GAS6Q14393 721 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 TTLL9Q3SXZ7 439 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 EOGTQ5NDL2 527 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 C9orf64Q5T6V5 341 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 AAGABQ6PD74 315 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 DSELQ8IZU8 1212 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 ZBTB2Q8N680 514 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 JADE3Q92613 823 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 RCN3Q96D15 328 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 KLHL32Q96NJ5 620 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 SEMA4BQ9NPR2 832 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 PKD2L2Q9NZM6 624 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 KLHL42Q9P2K6 505 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 MMP17Q9ULZ9 603 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 PSMD12O00232 456 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 ESRRBO95718 433 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 CHEK2O96017 543 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 ZNF30P17039 623 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 HK3P52790 923 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 MTTPP55157 894 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 AP2B1P63010 937 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 STX5Q13190 355 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 FASTKQ14296 549 aaKnown RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 STARD3Q14849 445 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 KIAA1211LQ6NV74 962 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 MYLK4Q86YV6 388 aaPredicted RBP17.49■□□□□ 0.39
SNX1-208ENST00000559844 PGAM4Q8N0Y7 254 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 CHST14Q8NCH0 376 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 HGH1Q9BTY7 390 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 CHRDQ9H2X0 955 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 PRSS16Q9NQE7 514 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 LATS2Q9NRM7 1088 aa17.49■□□□□ 0.39
SNX1-208ENST00000559844 SPATS2LQ9NUQ6 558 aaKnown RBP17.49■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms