RNA–Protein interactions for RNA: ENST00000559831.5

TPM1-221, Transcript of tropomyosin 1, humanhuman

TSL 5

Gene TPM1, Length 573 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-221ENST00000559831 LRRC8EQ6NSJ5 796 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 KLC3Q6P597 504 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 FAM83HQ6ZRV2 1179 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 CDHR3Q6ZTQ4 885 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 PIWIL4Q7Z3Z4 852 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 C11orf96Q7Z7L8 435 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 CLEC14AQ86T13 490 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 IQCHQ86VS3 1027 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 PARGQ86W56 976 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 DCP2Q8IU60 420 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 VRK3Q8IV63 474 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 CENPLQ8N0S6 344 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 MYO1HQ8N1T3 1032 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 OXR1Q8N573 874 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 CCDC63Q8NA47 563 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 ZBTB44Q8NCP5 570 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 OR2L2Q8NH16 312 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 C1orf216Q8TAB5 229 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 MGARPQ8TDB4 240 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 ASZ1Q8WWH4 475 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 SKA1Q96BD8 255 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 SCARF2Q96GP6 870 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 LINC00615Q96LM1 132 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 TIMM29Q9BSF4 260 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 C1QTNF1Q9BXJ1 281 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 TCEAL2Q9H3H9 227 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 C12orf65Q9H3J6 166 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 COG4Q9H9E3 785 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 NMRAL1Q9HBL8 299 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 SSU72Q9NP77 194 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 LATS2Q9NRM7 1088 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 GPR27Q9NS67 375 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 DNAJC28Q9NX36 388 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 KLHL42Q9P2K6 505 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 SLC23A2Q9UGH3 650 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 DCDC2Q9UHG0 476 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 PNMA8BQ9ULN7 279 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 SMG5Q9UPR3 1016 aaKnown RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 KCNK6Q9Y257 313 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 DNMT3AQ9Y6K1 912 aaPredicted RBP10.24□□□□□ -0.77
TPM1-221ENST00000559831 R4GN57 208 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 RALGAPA1Q6GYQ0 2036 aa10.24□□□□□ -0.77
TPM1-221ENST00000559831 ARHGEF17Q96PE2 2063 aaPredicted RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 A0A1B0GVT2 93 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 SLC5A10A0PJK1 596 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 PRR5-ARHGAP8B1AHC4 643 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 BTN3A1O00481 513 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 LIN7AO14910 233 aaPredicted RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 PRPF4O43172 522 aaKnown RBP eCLIP10.23□□□□□ -0.77
TPM1-221ENST00000559831 ZBTB14O43829 449 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 TYROBPO43914 113 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 SNX2O60749 519 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 CBSLP0DN79 551 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 COL6A2P12110 1019 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 ENO3P13929 434 aaPredicted RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 CTSEP14091 401 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 CD1DP15813 335 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 CBSP35520 551 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 ATP1A2P50993 1020 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 KPNA2P52292 529 aaKnown RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 NXPH1P58417 271 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 OVGP1Q12889 678 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 TSNAXIP1Q2TAA8 658 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 SPATS2Q86XZ4 545 aaKnown RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 PHACTR4Q8IZ21 702 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 CFAP61Q8NHU2 1237 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 FAM76AQ8TAV0 307 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 TCP10LQ8TDR4 215 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 GLMNQ92990 594 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 EXT2Q93063 718 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 ZC3H10Q96K80 434 aaKnown RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 UBXN10Q96LJ8 280 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 FAM111AQ96PZ2 611 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 PAIP2Q9BPZ3 127 aaKnown RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 DERL2Q9GZP9 239 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 TMEM168Q9H0V1 697 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 CAAP1Q9H8G2 361 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 MLXIPLQ9NP71 852 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 TMEM74BQ9NUR3 256 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 MKS1Q9NXB0 559 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 NKIRAS1Q9NYS0 192 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 TMEM216Q9P0N5 145 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 CAMSAP3Q9P1Y5 1249 aaPredicted RBP10.23□□□□□ -0.77
TPM1-221ENST00000559831 SLC17A7Q9P2U7 560 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 SUSD2Q9UGT4 822 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 PILRBQ9UKJ0 227 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 IKZF3Q9UKT9 509 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 GRID1Q9ULK0 1009 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 PSMD13Q9UNM6 376 aa10.23□□□□□ -0.77
TPM1-221ENST00000559831 KNL1Q8NG31 2342 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 C17orf113A0A1B0GUU1 675 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 PDZK1P1A8MUH7 402 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 H3BM21 787 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 CDC7O00311 574 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 VILLO15195 856 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 GPC4O75487 556 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 ZWINTO95229 277 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 TSPAN12O95859 305 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 MPC1LP0DKB6 136 aa10.22□□□□□ -0.77
TPM1-221ENST00000559831 JUNDP17535 347 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms