RNA–Protein interactions for RNA: ENST00000559460.5

SMAD3-211, Transcript of SMAD family member 3, humanhuman

TSL 4

Gene SMAD3, Length 568 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMAD3-211ENST00000559460 ARHGAP36Q6ZRI8 547 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 HOOK3Q86VS8 718 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 TRAPPC5Q8IUR0 188 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 DNAAF3Q8N9W5 541 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 GPR150Q8NGU9 434 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 CCDC110Q8TBZ0 833 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 PROKR1Q8TCW9 393 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 ZFPM2Q8WW38 1151 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 CENPIQ92674 756 aaPredicted RBP9.39□□□□□ -0.91
SMAD3-211ENST00000559460 MGME1Q9BQP7 344 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 C1GALT1Q9NS00 363 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 HAUS2Q9NVX0 235 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 HOOK1Q9UJC3 728 aaKnown RBP9.39□□□□□ -0.91
SMAD3-211ENST00000559460 AP1M2Q9Y6Q5 423 aa9.39□□□□□ -0.91
SMAD3-211ENST00000559460 RGSL1A5PLK6 1076 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 CHUKO15111 745 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 PRAMEF2O60811 474 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 CDK14O94921 469 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 PDHA1P08559 390 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 INHBBP09529 407 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ABOP16442 354 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 HLA-DPA1P20036 260 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 UGT1A4P22310 534 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 MMP11P24347 488 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 IL4RP24394 825 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 MMP13P45452 471 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 SPINT3P49223 89 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 LMAN1P49257 510 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 KPNA2P52292 529 aaKnown RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 NOMO3P69849 1222 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 APBA1Q02410 837 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 RBBP7Q16576 425 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 C8orf34Q49A92 452 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 PPP1R15BQ5SWA1 713 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 MARC1Q5VT66 337 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ALS2CLQ60I27 953 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ADGRG6Q86SQ4 1221 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 RMND5BQ96G75 393 aaPredicted RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ALPK1Q96QP1 1244 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 SMR3AQ99954 134 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 C11orf70Q9BRQ4 267 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 TMEM121Q9BTD3 319 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ZSCAN5AQ9BUG6 496 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 NAA15Q9BXJ9 866 aaKnown RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 DHX35Q9H5Z1 703 aaKnown RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 MRM3Q9HC36 420 aaKnown RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 DNAJB12Q9NXW2 375 aaKnown RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 KCNN3Q9UGI6 736 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ST6GALNAC2Q9UJ37 374 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 PSMD13Q9UNM6 376 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 AP4E1Q9UPM8 1137 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 CDYLQ9Y232 598 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 MRPS2Q9Y399 296 aaKnown RBP9.38□□□□□ -0.91
SMAD3-211ENST00000559460 ADGRG1Q9Y653 693 aa9.38□□□□□ -0.91
SMAD3-211ENST00000559460 C17orf113A0A1B0GUU1 675 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 EIF3CLB5ME19 914 aaKnown RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 FAM227AF5H4B4 570 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 CCP110O43303 1012 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ATMINO43313 823 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 KCNJ13O60928 360 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 OR2B3O76000 313 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 USP1O94782 785 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 HEXAP06865 529 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 HSP90AA1P07900 732 aaKnown RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 UMODP07911 640 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 MMEP08473 750 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 MSL3P1P0C860 447 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 CBSLP0DN79 551 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ERCC2P18074 760 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 POLR2CP19387 275 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ITGAXP20702 1163 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 MST1P26927 711 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 CBSP35520 551 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 TNFSF10P50591 281 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 PPP2R2BQ00005 443 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 RPE65Q16518 533 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 NKAIN1Q4KMZ8 207 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF789Q5FWF6 425 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ZNF385CQ66K41 422 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 RHBDD2Q6NTF9 364 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 TTI2Q6NXR4 508 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 RFX8Q6ZV50 586 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 SPPL2CQ8IUH8 684 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ARHGAP12Q8IWW6 846 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 FAM71AQ8IYT1 594 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ACRBPQ8NEB7 543 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 LPCAT1Q8NF37 534 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 GDAP1Q8TB36 358 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 ADAMTS18Q8TE60 1221 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 NELFBQ8WX92 580 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 GLYATL1Q969I3 302 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 EIF3CQ99613 913 aaKnown RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 TREX2Q9BQ50 279 aaPredicted RBP9.37□□□□□ -0.91
SMAD3-211ENST00000559460 NT5MQ9NPB1 228 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 RAD18Q9NS91 495 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 PPT2Q9UMR5 302 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 CTNND2Q9UQB3 1225 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 WDR37Q9Y2I8 494 aa9.37□□□□□ -0.91
SMAD3-211ENST00000559460 FAM237AA0A1B0GTK4 181 aa9.36□□□□□ -0.91
SMAD3-211ENST00000559460 MTX2O75431 263 aa9.36□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms