RNA–Protein interactions for RNA: ENST00000558285.5

USP3-208, Transcript of ubiquitin specific peptidase 3, humanhuman

TSL 1 (best) BASIC

Gene USP3, Length 1,742 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP3-208ENST00000558285 LDB2O43679 373 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 BUD23O43709 281 aaKnown RBP8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A9O60656 530 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UBXN7O94888 489 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 FUCA1P04066 466 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A6P19224 532 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 TPSB2P20231 275 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A1P22309 533 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A4P22310 534 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A3P35503 534 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A5P35504 534 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 GDF10P55107 478 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 TMPRSS15P98073 1019 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 ZFP36L1Q07352 338 aaKnown RBP8.5□□□□□ -1.05
USP3-208ENST00000558285 PPP1R7Q15435 360 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 TPSAB1Q15661 275 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 PLA2G4EQ3MJ16 856 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 DCAF12Q5T6F0 453 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 MRNIPQ6NTE8 343 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 TMEM26Q6ZUK4 368 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 USP53Q70EK8 1073 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 HOOK3Q86VS8 718 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 LRRC6Q86X45 466 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 CARFQ8N187 725 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 RAB42Q8N4Z0 105 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 RASGEF1AQ8N9B8 481 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 OR6P1Q8NGX9 317 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 OR2L2Q8NH16 312 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 ACTRT1Q8TDG2 376 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 NCSTNQ92542 709 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 CDKN2AIPNLQ96HQ2 116 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 TAAR9Q96RI9 348 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 CD180Q99467 661 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 EFHD1Q9BUP0 239 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 TRIT1Q9H3H1 467 aaKnown RBP8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A7Q9HAW7 530 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A10Q9HAW8 530 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 UGT1A8Q9HAW9 530 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 PRDM8Q9NQV8 689 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 PISDQ9UG56 409 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 RAXQ9Y2V3 346 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 LRRK1Q38SD2 2015 aa8.5□□□□□ -1.05
USP3-208ENST00000558285 CEP295Q9C0D2 2601 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 A0A1W2PQM1 296 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 TCRBV7S2A1N4TA0A589 114 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CTAGE9A4FU28 777 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 AGAP14A8MT82 685 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 B4E171 279 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 H3BMM5 538 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 SMAPO00193 183 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 LIN7AO14910 233 aaPredicted RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 PPM1DO15297 605 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 B4GAT1O43505 415 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 MTX2O75431 263 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 TPH1P17752 444 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 ACRV1P26436 265 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CD1CP29017 333 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 PBLDP30039 288 aaPredicted RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 EIF2S3P41091 472 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 TSPAN7P41732 249 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CD151P48509 253 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 PRLHRP49683 370 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 SEPT7Q16181 437 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 METRNLQ641Q3 311 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 TTC23LQ6PF05 361 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CEACAM20Q6UY09 585 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 SYDE1Q6ZW31 735 aaPredicted RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 CLEC14AQ86T13 490 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 BPHLQ86WA6 291 aaPredicted RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 OOSP2Q86WS3 158 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 OR52K1Q8NGK4 314 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 DNAJC1Q96KC8 554 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 CCDC74BQ96LY2 380 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 PANX3Q96QZ0 392 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 DDA1Q9BW61 102 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 FOXP3Q9BZS1 431 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CASS4Q9NQ75 786 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 IMP3Q9NV31 184 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 SMARCAL1Q9NZC9 954 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 ARID1BQ8NFD5 2236 aaPredicted RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 TRBV23OR9-2A0A075B6M9 112 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 A0A0U1RQJ8 604 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CTAGE15A4D2H0 777 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 A6NCN8 305 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 MROH6A6NGR9 719 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 FANCGO15287 622 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CAPN5O15484 640 aaPredicted RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 RASSF9O75901 435 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 KRT14P02533 472 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 ANKRD34CP0C6C1 535 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CTAGE8P0CG41 777 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 THRAP10827 490 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 MTHFD1P11586 935 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 MLNP12872 115 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 RPL10P27635 214 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 CXCR5P32302 372 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 CCT5P48643 541 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 MAPK10P53779 464 aa8.49□□□□□ -1.05
USP3-208ENST00000558285 UBE2IP63279 158 aaKnown RBP8.49□□□□□ -1.05
USP3-208ENST00000558285 GPS1Q13098 491 aa8.49□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms