RNA–Protein interactions for RNA: ENST00000557713.5

SCFD1-224, Transcript of sec1 family domain containing 1, humanhuman

TSL 4

Gene SCFD1, Length 556 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-224ENST00000557713 SPDYE1Q8NFV5 336 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 OR8K5Q8NH50 307 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 LINC00615Q96LM1 132 aaPredicted RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 C12orf66Q96MD2 445 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 LRFN5Q96NI6 719 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 KIR3DX1Q9H7L2 352 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 LATS2Q9NRM7 1088 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 TRHDEQ9UKU6 1024 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 BTRCQ9Y297 605 aa15.55■□□□□ 0.08
SCFD1-224ENST00000557713 PCDHGA9Q9Y5G4 932 aaKnown RBP15.55■□□□□ 0.08
SCFD1-224ENST00000557713 UTP20O75691 2785 aaKnown RBP15.54■□□□□ 0.08
SCFD1-224ENST00000557713 hCG_1818297A0A087WSY0 165 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 BLACEA4D250 179 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 KLHL33A6NCF5 533 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 AGAP14A8MT82 685 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 HACD1B0YJ81 288 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 CBFA2T2O43439 604 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 MFAP3LO75121 409 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 LPOP22079 712 aaPredicted RBP15.54■□□□□ 0.08
SCFD1-224ENST00000557713 AKT1P31749 480 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 KPNA2P52292 529 aaKnown RBP15.54■□□□□ 0.08
SCFD1-224ENST00000557713 HADHBP55084 474 aaKnown RBP15.54■□□□□ 0.08
SCFD1-224ENST00000557713 BCL7AQ4VC05 210 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 TMTC4Q5T4D3 741 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 CPZQ66K79 652 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 CAPRIN2Q6IMN6 1127 aaKnown RBP15.54■□□□□ 0.08
SCFD1-224ENST00000557713 FBXO38Q6PIJ6 1188 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 TMEM126BQ8IUX1 230 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 KATNAL2Q8IYT4 538 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 RCOR2Q8IZ40 523 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 NAT14Q8WUY8 206 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 MR1Q95460 341 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 PPM1MQ96MI6 270 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 QKIQ96PU8 341 aaKnown RBP eCLIP15.54■□□□□ 0.081e-6■■■■■ 34.7
SCFD1-224ENST00000557713 GORASP1Q9BQQ3 440 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 ASB8Q9H765 288 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 ARL5AQ9Y689 179 aa15.54■□□□□ 0.08
SCFD1-224ENST00000557713 USP9YO00507 2555 aaPredicted RBP15.54■□□□□ 0.08
SCFD1-224ENST00000557713 ARGFXA6NJG6 315 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 TTLL8A6PVC2 850 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 SRP72O76094 671 aaKnown RBP15.53■□□□□ 0.08
SCFD1-224ENST00000557713 ZRANB2O95218 330 aaKnown RBP eCLIP15.53■□□□□ 0.08
SCFD1-224ENST00000557713 PRAMEF1O95521 474 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 PYGMP11217 842 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 ADRA1AP35348 466 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 CCL11P51671 97 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 XIAPP98170 497 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 CHAF1BQ13112 559 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 MSLNQ13421 630 aaPredicted RBP15.53■□□□□ 0.08
SCFD1-224ENST00000557713 TAF1AQ15573 450 aaPredicted RBP15.53■□□□□ 0.08
SCFD1-224ENST00000557713 PLEKHS1Q5SXH7 462 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 LCN10Q6JVE6 187 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 ARMC6Q6NXE6 501 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 RANBP10Q6VN20 620 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 GALNT11Q8NCW6 608 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 OR4K2Q8NGD2 314 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 ADAMTS17Q8TE56 1095 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 HAUS1Q96CS2 278 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 RMDN2Q96LZ7 410 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 ANP32EQ9BTT0 268 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 SLC25A23Q9BV35 468 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 FSD1LQ9BXM9 530 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 ING2Q9H160 280 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 CHST8Q9H2A9 424 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 GOLPH3Q9H4A6 298 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 RSPH14Q9UHP6 348 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 COLEC10Q9Y6Z7 277 aa15.53■□□□□ 0.08
SCFD1-224ENST00000557713 USP9XQ93008 2570 aaPredicted RBP15.53■□□□□ 0.08
SCFD1-224ENST00000557713 SLC9B1P1A6NJY1 282 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 C2orf81A6NN90 581 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 MEN1O00255 615 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 VPS4BO75351 444 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 CEACAM4O75871 244 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 POLBP06746 335 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 KLK3P07288 261 aaPredicted RBP15.52■□□□□ 0.08
SCFD1-224ENST00000557713 TPM1P09493 284 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 RAB40ALP0C0E4 278 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 SLC35G4P0C7Q5 338 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 POLR2CP19387 275 aaPredicted RBP15.52■□□□□ 0.08
SCFD1-224ENST00000557713 RBL1P28749 1068 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 UQCRFS1P47985 274 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 ARCN1P48444 511 aaKnown RBP15.52■□□□□ 0.08
SCFD1-224ENST00000557713 PGDP52209 483 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 GEMP55040 296 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 GSDMDP57764 484 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 NADK2Q4G0N4 442 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 PRAMEF17Q5VTA0 474 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 DAAM2Q86T65 1068 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 CFAP206Q8IYR0 622 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 DSELQ8IZU8 1212 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 LILRA3Q8N6C8 439 aaPredicted RBP15.52■□□□□ 0.08
SCFD1-224ENST00000557713 OR4E2Q8NGC2 313 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 CPT1CQ8TCG5 803 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 FICDQ9BVA6 458 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 GBA3Q9H227 469 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 C10orf88Q9H8K7 445 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 LRRC4CQ9HCJ2 640 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 ACSS2Q9NR19 701 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 C1GALT1Q9NS00 363 aa15.52■□□□□ 0.08
SCFD1-224ENST00000557713 FAM8A1Q9UBU6 413 aa15.52■□□□□ 0.08
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms