RNA–Protein interactions for RNA: ENST00000557454.1

NEDD1-211, Transcript of neural precursor cell expressed, developmentally down-regulated 1, humanhuman

TSL 4

Gene NEDD1, Length 564 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD1-211ENST00000557454 IL4RP24394 825 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 SOX11P35716 441 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 USP8P40818 1118 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 LMAN1P49257 510 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 CTSCP53634 463 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 DCDP81605 110 aaKnown RBP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 CACNG1Q06432 222 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 RUNX1T1Q06455 604 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 NSUN2Q08J23 767 aaKnown RBP eCLIP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 KEAP1Q14145 624 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 C15orf59Q2T9L4 293 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 TUBB8Q3ZCM7 444 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 AGAP9Q5VTM2 703 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 KIRREL2Q6UWL6 708 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 CEP128Q6ZU80 1094 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 NLRP8Q86W28 1048 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 OOSP2Q86WS3 158 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 FAM20CQ8IXL6 584 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 EMC1Q8N766 993 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 GOT1L1Q8NHS2 421 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 TEKT4Q8WW24 435 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 SCAND2PQ9GZW5 306 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 RNF32Q9H0A6 362 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 LRRC19Q9H756 370 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 NEUROD4Q9HD90 331 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 KCNJ16Q9NPI9 418 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 FAM207AQ9NSI2 230 aaPredicted RBP9.09□□□□□ -0.95
NEDD1-211ENST00000557454 PTGFRNQ9P2B2 879 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 SERTAD3Q9UJW9 196 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 L3MBTL1Q9Y468 752 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 HCFC1P51610 2035 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 CCDC88CQ9P219 2028 aa9.09□□□□□ -0.95
NEDD1-211ENST00000557454 NUP210LQ5VU65 1888 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 A0A1W2PQ67 120 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 OR6C74A6NCV1 312 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 PMM2O15305 246 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 TSPAN12O95859 305 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 CD63P08962 238 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 ZNF7P17097 686 aaPredicted RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 CDH3P22223 829 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 GCGRP47871 477 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 PAPOLAP51003 745 aaKnown RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 STC1P52823 247 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 NKX6-1P78426 367 aaPredicted RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 HSF1Q00613 529 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 NKAIN1Q4KMZ8 207 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 C2CD6Q53TS8 623 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 RESP18Q5W5W9 173 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 ARMC6Q6NXE6 501 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 WASH2PQ6VEQ5 465 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 LAPTM4BQ86VI4 370 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 CARFQ8N187 725 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 MARVELD2Q8N4S9 558 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 CPSF7Q8N684 471 aaKnown RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 LILRB4Q8NHJ6 448 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 ASB5Q8WWX0 329 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 HAS2Q92819 552 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 NACC2Q96BF6 587 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 WDR24Q96S15 920 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 MESP1Q9BRJ9 268 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 UPF2Q9HAU5 1272 aaKnown RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 SYTL2Q9HCH5 934 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 UBE2TQ9NPD8 197 aaPredicted RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 DHCR7Q9UBM7 475 aaKnown RBP9.08□□□□□ -0.96
NEDD1-211ENST00000557454 TMEM59LQ9UK28 342 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 RNF6Q9Y252 685 aa9.08□□□□□ -0.96
NEDD1-211ENST00000557454 TGP01266 2768 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 NPIPA5E9PKD4 350 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 KLK8O60259 260 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 ZRANB2O95218 330 aaKnown RBP eCLIP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 PGLSO95336 258 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 WDPCPO95876 746 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 MSL3P1P0C860 447 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 IDSP22304 550 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 CHRNB4P30926 498 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 EPHB1P54762 984 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 CETN1Q12798 172 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 CBLBQ13191 982 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 SYCP1Q15431 976 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 HENMT1Q5T8I9 393 aaKnown RBP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 SHEQ5VZ18 495 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 RHBDD2Q6NTF9 364 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 GJB7Q6PEY0 223 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 NAPRTQ6XQN6 538 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 ARHGAP36Q6ZRI8 547 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 C11orf96Q7Z7L8 435 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 ULK2Q8IYT8 1036 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 CLYBLQ8N0X4 340 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 EID3Q8N140 333 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 SIRT6Q8N6T7 355 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 EHBP1Q8NDI1 1231 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 OR11G2Q8NGC1 345 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 PROKR1Q8TCW9 393 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 BRIX1Q8TDN6 353 aaKnown RBP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 CCDC47Q96A33 483 aaKnown RBP9.07□□□□□ -0.96
NEDD1-211ENST00000557454 TIMM29Q9BSF4 260 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 AP1M1Q9BXS5 423 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 KLHL25Q9H0H3 589 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 SP110Q9HB58 689 aa9.07□□□□□ -0.96
NEDD1-211ENST00000557454 NOD2Q9HC29 1040 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 225.4 ms