RNA–Protein interactions for RNA: ENST00000557439.5

XRCC3-218, Transcript of X-ray repair cross complementing 3, humanhuman

TSL 5

Gene XRCC3, Length 2,599 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC3-218ENST00000557439 B3GALT4O96024 378 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 HMGA1P17096 107 aaKnown RBP17.44■□□□□ 0.38
XRCC3-218ENST00000557439 NKG7Q16617 165 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 ENPP6Q6UWR7 440 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 LRRC8DQ7L1W4 858 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 SERPINA9Q86WD7 417 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 KRTCAP2Q8N6L1 136 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 MUS81Q96NY9 551 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 CGREF1Q99674 301 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 GALNT8Q9NY28 637 aa17.44■□□□□ 0.38
XRCC3-218ENST00000557439 ANKRD28O15084 1053 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 ENO2P09104 434 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-218ENST00000557439 SHMT2P34897 504 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 ENTPD1P49961 510 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 TRAF3Q13114 568 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 ADGRF1Q5T601 910 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 TBC1D21Q8IYX1 336 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 EGFL8Q99944 293 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 TTLL2Q9BWV7 592 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 RHBDL2Q9NX52 303 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 LRFN2Q9ULH4 789 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 TMCO1Q9UM00 188 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 PKP3Q9Y446 797 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 NUP214P35658 2090 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-218ENST00000557439 A0A0J9YVX5 310 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 A0A1W2PQ45 241 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-218ENST00000557439 A0A1W2PQY0 241 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 KRT87PA6NCN2 255 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 UPK1AO00322 258 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 PRMT5O14744 637 aaPredicted RBP17.43■□□□□ 0.38
XRCC3-218ENST00000557439 PRAMEF1O95521 474 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 CD247P20963 164 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 HTR1EP28566 365 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 HMOX2P30519 316 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 PTGER3P43115 390 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 RAB39AQ14964 217 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 KCTD8Q6ZWB6 473 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 MILR1Q7Z6M3 343 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 LRRC43Q8N309 656 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 FAM81AQ8TBF8 368 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 TMBIM1Q969X1 311 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 CXorf21Q9HAI6 301 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 STARD7Q9NQZ5 370 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 ZNHIT2Q9UHR6 403 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 DHRS7Q9Y394 339 aa17.43■□□□□ 0.38
XRCC3-218ENST00000557439 GAPDHSO14556 408 aaPredicted RBP17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ESR1P03372 595 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ESRRGP62508 458 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ZXDBP98169 803 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ZBED5Q49AG3 693 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ABRAXAS1Q6UWZ7 409 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 STK32CQ86UX6 486 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 PHACTR4Q8IZ21 702 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 OR10A6Q8NH74 314 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 TSPEARQ8WU66 669 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 VN1R3Q9BXE9 311 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 SLC6A13Q9NSD5 602 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 KLQ9UEF7 1012 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ST14Q9Y5Y6 855 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 A0A1W2PPW3 197 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 NOBOXO60393 691 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 SLC25A14O95258 325 aaPredicted RBP17.42■□□□□ 0.38
XRCC3-218ENST00000557439 CSKP41240 450 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 FAM174BQ3ZCQ3 159 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ANKS3Q6ZW76 656 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 EFL1Q7Z2Z2 1120 aaKnown RBP17.42■□□□□ 0.38
XRCC3-218ENST00000557439 PATL1Q86TB9 770 aaKnown RBP17.42■□□□□ 0.38
XRCC3-218ENST00000557439 GPR180Q86V85 440 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 RIMKLAQ8IXN7 391 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 PAPD5Q8NDF8 572 aaKnown RBP17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ITFG1Q8TB96 612 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 BPIFB1Q8TDL5 484 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 ASB8Q9H765 288 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 SMURF2Q9HAU4 748 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 HEBP1Q9NRV9 189 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 NUDT4Q9NZJ9 180 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 VPS51Q9UID3 782 aa17.42■□□□□ 0.38
XRCC3-218ENST00000557439 CLDN7O95471 211 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 MYCP01106 439 aaPredicted RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 FCGR1AP12314 374 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 CLCN4P51793 760 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 GRIK2Q13002 908 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 DCTN2Q13561 401 aaKnown RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 ANKDD1AQ495B1 522 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 ADGRG2Q8IZP9 1017 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 APCDD1Q8J025 514 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 C10orf111Q8N326 155 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 TNIP2Q8NFZ5 429 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 ABTB1Q969K4 478 aaPredicted RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 AURKBQ96GD4 344 aaPredicted RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 SCLYQ96I15 445 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 ZNF583Q96ND8 569 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 THUMPD3Q9BV44 507 aaKnown RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 TIMMDC1Q9NPL8 285 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 VPS9D1Q9Y2B5 631 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 PRRC2BQ5JSZ5 2229 aaKnown RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 C1orf232A0A0U1RR37 186 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 KANSL1LA0AUZ9 987 aa17.41■□□□□ 0.38
XRCC3-218ENST00000557439 EEF1B2P24534 225 aaKnown RBP17.41■□□□□ 0.38
XRCC3-218ENST00000557439 ADARB1P78563 741 aaKnown RBP17.41■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms