RNA–Protein interactions for RNA: ENST00000556833.1

CHD8-211, Transcript of chromodomain helicase DNA binding protein 8, humanhuman

TSL 5

Gene CHD8, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD8-211ENST00000556833 GSAPA4D1B5 854 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 ZNF487B1APH4 448 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 ZNF185O15231 689 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 STX7O15400 261 aaKnown RBP14.41□□□□□ -0.1
CHD8-211ENST00000556833 PRAMEF1O95521 474 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 AGTP01019 485 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 HLA-DPA1P20036 260 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 CDKN2BP42772 138 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 MARCKSL1P49006 195 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 HSD11B2P80365 405 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 TMPRSS15P98073 1019 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 DMPKQ09013 629 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 ABRQ12979 859 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 KRT33BQ14525 404 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 SLC14A2Q15849 920 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 CAPRIN2Q6IMN6 1127 aaKnown RBP14.41□□□□□ -0.1
CHD8-211ENST00000556833 CYB5D1Q6P9G0 228 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 SPOCD1Q6ZMY3 1216 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 APLFQ8IW19 511 aaPredicted RBP14.41□□□□□ -0.1
CHD8-211ENST00000556833 D2HGDHQ8N465 521 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 ENDOVQ8N8Q3 282 aaKnown RBP14.41□□□□□ -0.1
CHD8-211ENST00000556833 OR4E2Q8NGC2 313 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 OR8K1Q8NGG5 319 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 ZNF501Q96CX3 271 aaPredicted RBP14.41□□□□□ -0.1
CHD8-211ENST00000556833 CLIP3Q96DZ5 547 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 RMDN2Q96LZ7 410 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 FSD1LQ9BXM9 530 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 FAM96AQ9H5X1 160 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 RSPH14Q9UHP6 348 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 SLC24A2Q9UI40 661 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 FKBPLQ9UIM3 349 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 FARSAQ9Y285 508 aaKnown RBP14.41□□□□□ -0.1
CHD8-211ENST00000556833 FER1L5A0AVI2 2057 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 PIKFYVEQ9Y2I7 2098 aa14.41□□□□□ -0.1
CHD8-211ENST00000556833 SLC9B1P1A6NJY1 282 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 CCL22O00626 93 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 SEMA7AO75326 666 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 SLC35G4P0C7Q5 338 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 CDH3P22223 829 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 HNRNPH3P31942 346 aaKnown RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 ARHGAP25P42331 645 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 TUBB4BP68371 445 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 MRPL49Q13405 166 aaKnown RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 LAMB3Q13751 1172 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 ITGA9Q13797 1035 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 TUBB2AQ13885 445 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 LONRF2Q1L5Z9 754 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 PTCHD3Q3KNS1 767 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 FHL5Q5TD97 284 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 SYVN1Q86TM6 617 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 OR4K2Q8NGD2 314 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 ZNF398Q8TD17 642 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 SRPK1Q96SB4 655 aaKnown RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 DNAJC7Q99615 494 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 TUBB2BQ9BVA1 445 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 GPR87Q9BY21 358 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 TRABDQ9H4I3 376 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 NHEJ1Q9H9Q4 299 aaPredicted RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 KCND1Q9NSA2 647 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 ZNHIT6Q9NWK9 470 aaKnown RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 DDX56Q9NY93 547 aaKnown RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 SEMA5BQ9P283 1151 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 PLEKHB1Q9UF11 243 aaPredicted RBP14.4□□□□□ -0.1
CHD8-211ENST00000556833 SNX7Q9UNH6 387 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 TFR2Q9UP52 801 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 UNC79Q9P2D8 2635 aa14.4□□□□□ -0.1
CHD8-211ENST00000556833 HIVEP3Q5T1R4 2406 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 MACROD2A1Z1Q3 448 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 TMEM150CB9EJG8 249 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 ZBTB11O95625 1053 aaPredicted RBP14.39□□□□□ -0.11
CHD8-211ENST00000556833 PVRP15151 417 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 LMAN1P49257 510 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 TFDP2Q14188 446 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 TMTC4Q5T4D3 741 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 METRNLQ641Q3 311 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 VSIG1Q86XK7 387 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 RHOT2Q8IXI1 618 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 CFAP206Q8IYR0 622 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 THAP4Q8WY91 577 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 P3H4Q92791 437 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 CCDC42Q96M95 316 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 QKIQ96PU8 341 aaKnown RBP eCLIP14.39□□□□□ -0.111e-6■■■■□ 26
CHD8-211ENST00000556833 FCRL5Q96RD9 977 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 CD180Q99467 661 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 FAM118BQ9BPY3 351 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 HEMGNQ9BXL5 484 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 ASB8Q9H765 288 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 CASS4Q9NQ75 786 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 ABHD10Q9NUJ1 306 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 CENPEQ02224 2701 aa14.39□□□□□ -0.11
CHD8-211ENST00000556833 SNRNP200O75643 2136 aaKnown RBP14.38□□□□□ -0.11
CHD8-211ENST00000556833 SSU72P8A0A1W2PR75 194 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 MGAT4DA6NG13 374 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 H7C0C1 242 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 KLK3P07288 261 aaPredicted RBP14.38□□□□□ -0.11
CHD8-211ENST00000556833 ATP5OP48047 213 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 ITGA1P56199 1179 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 KYNUQ16719 465 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 PLEKHS1Q5SXH7 462 aa14.38□□□□□ -0.11
CHD8-211ENST00000556833 LRRC38Q5VT99 294 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms