RNA–Protein interactions for RNA: ENST00000556768.5

SCFD1-222, Transcript of sec1 family domain containing 1, humanhuman

TSL 1 (best)

Gene SCFD1, Length 1,829 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-222ENST00000556768 TBL1YQ9BQ87 522 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 DESI2Q9BSY9 194 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 DDA1Q9BW61 102 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FRMD8P1Q9BZ68 369 aaPredicted RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 C10orf88Q9H8K7 445 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 LRRC40Q9H9A6 602 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 VPS37BQ9H9H4 285 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PDP2Q9P2J9 529 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 TRIM10Q9UDY6 481 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 SLC23A2Q9UGH3 650 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 KLHL3Q9UH77 587 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 CRLS1Q9UJA2 301 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 ACSL5Q9ULC5 683 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 GUCA1BQ9UMX6 200 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 REXO2Q9Y3B8 237 aaKnown RBP7.2□□□□□ -1.26
SCFD1-222ENST00000556768 PCDHGA3Q9Y5H0 932 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 SLC30A1Q9Y6M5 507 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 COLEC10Q9Y6Z7 277 aa7.2□□□□□ -1.26
SCFD1-222ENST00000556768 FASNP49327 2511 aaKnown RBP7.19□□□□□ -1.26
SCFD1-222ENST00000556768 A6NCN8 305 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 OR2AG2A6NM03 316 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 C9orf172C9J069 976 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 ARHGAP6O43182 974 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 SRP72O76094 671 aaKnown RBP7.19□□□□□ -1.26
SCFD1-222ENST00000556768 TYRP1P17643 537 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 ITGALP20701 1170 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 GSTT1P30711 240 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 SLC19A1P41440 591 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 ARL4DP49703 201 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 PLCL1Q15111 1095 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 GPR33Q49SQ1 333 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 GPRC6AQ5T6X5 926 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF547Q8IVP9 402 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 DNAAF3Q8N9W5 541 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 KIAA1143Q96AT1 154 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-222ENST00000556768 SGF29Q96ES7 293 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 COPS8Q99627 209 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 APOL2Q9BQE5 337 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 EFHD1Q9BUP0 239 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 TBC1D10AQ9BXI6 508 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 TRIT1Q9H3H1 467 aaKnown RBP7.19□□□□□ -1.26
SCFD1-222ENST00000556768 ARNT2Q9HBZ2 717 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 SLC40A1Q9NP59 571 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 FBXO8Q9NRD0 319 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 SMOXQ9NWM0 555 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 PACSIN2Q9UNF0 486 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF148Q9UQR1 794 aa7.19□□□□□ -1.26
SCFD1-222ENST00000556768 PCYT1BQ9Y5K3 369 aaPredicted RBP7.19□□□□□ -1.26
SCFD1-222ENST00000556768 MGAT4DA6NG13 374 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 OR52A4PA6NMU1 304 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ERI2A8K979 691 aaKnown RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 IQCJ-SCHIP1C9J366 451 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 F8W8V4 182 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 EREGO14944 169 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 CAPN5O15484 640 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 IFNB1P01574 187 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 SLC35G4P0C7Q5 338 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 SFTPCP11686 197 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 MAP4P27816 1152 aaKnown RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ADRA1AP35348 466 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ETV5P41161 510 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 UBE2IP63279 158 aaKnown RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 FOXM1Q08050 763 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 DMPKQ09013 629 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 PWP1Q13610 501 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 COL9A2Q14055 689 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 RPS6KA1Q15418 735 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 TGIF1Q15583 401 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 SKIDA1Q1XH10 827 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ARMC6Q6NXE6 501 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 AADACL2Q6P093 401 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 DET1Q7L5Y6 550 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 TAS2R42Q7RTR8 314 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ARHGAP22Q7Z5H3 698 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 SNX20Q7Z614 316 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 BTLAQ7Z6A9 289 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ZFAND4Q86XD8 727 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 CCDC89Q8N998 374 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 RASGEF1AQ8N9B8 481 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ZFPM2Q8WW38 1151 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 JPH3Q8WXH2 748 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 HES6Q96HZ4 224 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 TGM7Q96PF1 710 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 TMEM121Q9BTD3 319 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 FOXJ2Q9P0K8 574 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 ZNF624Q9P2J8 865 aaPredicted RBP7.18□□□□□ -1.26
SCFD1-222ENST00000556768 HEBP2Q9Y5Z4 205 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 B3GALT1Q9Y5Z6 326 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 PIEZO2Q9H5I5 2752 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 RP1P56715 2156 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 AHCTF1Q8WYP5 2266 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 PTPRQQ9UMZ3 2332 aa7.18□□□□□ -1.26
SCFD1-222ENST00000556768 IFRD1O00458 451 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ZIC2O95409 532 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ITGB2P05107 769 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CCDC175P0C221 793 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 ATP1B2P14415 290 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 NDUFS1P28331 727 aa7.17□□□□□ -1.26
SCFD1-222ENST00000556768 PBLDP30039 288 aaPredicted RBP7.17□□□□□ -1.26
SCFD1-222ENST00000556768 CSF2RBP32927 897 aa7.17□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms