RNA–Protein interactions for RNA: ENST00000556445.1

SRP54-211, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 530 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-211ENST00000556445 FRMD1Q8N878 549 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 ZBTB8BQ8NAP8 495 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 POGLUT1Q8NBL1 392 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 NOA1Q8NC60 698 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 TMEM35BQ8NCS4 154 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 BEST2Q8NFU1 509 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 GADD45GIP1Q8TAE8 222 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 OLIG1Q8TAK6 271 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CEP76Q8TAP6 659 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SLC20A1Q8WUM9 679 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 ZNF75CPQ92670 426 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 SCAMP4Q969E2 229 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 SIPA1Q96FS4 1042 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 PERPQ96FX8 193 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 PDLIM5Q96HC4 596 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 NR1H4Q96RI1 486 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 NUP85Q9BW27 656 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TEX12Q9BXU0 123 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MAK16Q9BXY0 300 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 FAM129AQ9BZQ8 928 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 RAB17Q9H0T7 212 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TASP1Q9H6P5 420 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 RMI1Q9H9A7 625 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 HOMER3Q9NSC5 361 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 RLIMQ9NVW2 624 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TAS2R3Q9NYW6 316 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 ACTR3BQ9P1U1 418 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MARCH4Q9P2E8 410 aaPredicted RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 CNOT8Q9UFF9 292 aaKnown RBP5.16□□□□□ -1.58
SRP54-211ENST00000556445 MID2Q9UJV3 735 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MTUS1Q9ULD2 1270 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 KIAA1257Q9ULG3 409 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 KLHL20Q9Y2M5 609 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 TRIM17Q9Y577 477 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 INSL6Q9Y581 213 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 ALG6Q9Y672 507 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 MROH7Q68CQ1 1323 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 CITO14578 2027 aa5.16□□□□□ -1.58
SRP54-211ENST00000556445 C11orf97A0A1B0GVM6 126 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 C17orf102A2RUQ5 167 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 A4D1N5 150 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 FAM90A20PA6NIJ5 464 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 TMEM233B4DJY2 109 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 AP3B1O00203 1094 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 HAS3O00219 553 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 MAP2K7O14733 419 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 CASQ2O14958 399 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 DUSP11O75319 330 aaKnown RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 OPN1MWP04001 364 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 VTNP04004 478 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 GJB1P08034 283 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 SMIM10L2AP0DMW4 78 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 SMIM10L2BP0DMW5 78 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 OPN1MW2P0DN77 364 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 OPN1MW3P0DN78 364 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 DARSP14868 501 aaKnown RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 ARF4P18085 180 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 FBLP22087 321 aaKnown RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 NFKBIAP25963 317 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 HOXD10P28358 340 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 CDH5P33151 784 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 BSGP35613 385 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 TNFSF9P41273 254 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 MTHFRP42898 656 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 CAPZA2P47755 286 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 CD151P48509 253 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 RWDD2BP57060 319 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 MYL6P60660 151 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 VSNL1P62760 191 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 FPGSQ05932 587 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 PIGFQ07326 219 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 C2orf54Q08AI8 447 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 NSUN2Q08J23 767 aaKnown RBP eCLIP5.15□□□□□ -1.59
SRP54-211ENST00000556445 SGCGQ13326 291 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 CUL1Q13616 776 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 DHX34Q14147 1143 aaKnown RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 MESDQ14696 234 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 TMEM132DQ14C87 1099 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 ARHGEF6Q15052 776 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 TYSND1Q2T9J0 566 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 BTBD16Q32M84 506 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 ZNF628Q5EBL2 1059 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 RAB41Q5JT25 222 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 TOR1AIP1Q5JTV8 583 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 KRBOX4Q5JUW0 171 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 PLEKHM3Q6ZWE6 761 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 MON1AQ86VX9 555 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 HACE1Q8IYU2 909 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 DENND6BQ8NEG7 585 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 OR5B17Q8NGF7 314 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 ACTRT2Q8TDY3 377 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 SLC22A18Q96BI1 424 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 ARHGEF26Q96DR7 871 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 RAB3IPQ96QF0 476 aaPredicted RBP5.15□□□□□ -1.59
SRP54-211ENST00000556445 ABHD1Q96SE0 405 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 PCDHB18PQ96TA0 734 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 C1orf43Q9BWL3 253 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 MTMR12Q9C0I1 747 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 LHX5Q9H2C1 402 aa5.15□□□□□ -1.59
SRP54-211ENST00000556445 PDZD7Q9H5P4 517 aa5.15□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms