RNA–Protein interactions for RNA: ENST00000556433.5

ACTN1-220, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 1,259 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-220ENST00000556433 SPDYE1Q8NFV5 336 aaPredicted RBP22.07■■□□□ 1.12
ACTN1-220ENST00000556433 OR13C4Q8NGS5 318 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 ZFPM2Q8WW38 1151 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 FAM96AQ9H5X1 160 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 KCND3Q9UK17 655 aa22.07■■□□□ 1.12
ACTN1-220ENST00000556433 REXO2Q9Y3B8 237 aaKnown RBP22.07■■□□□ 1.12
ACTN1-220ENST00000556433 UBA6A0AVT1 1052 aaPredicted RBP22.06■■□□□ 1.12
ACTN1-220ENST00000556433 OR5K3A6NET4 321 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 BTNL10A8MVZ5 291 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 TIAF1O95411 115 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 SLC35G4P0C7Q5 338 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 RALBP11234 206 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 ACY1Q03154 408 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 TLE1Q04724 770 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 SEPT6Q14141 434 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 ERV3-1Q14264 604 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 SPARCL1Q14515 664 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 GSE1Q14687 1217 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 DENND5AQ6IQ26 1287 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 PWWP2BQ6NUJ5 590 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 ARMC6Q6NXE6 501 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 BPHLQ86WA6 291 aaPredicted RBP22.06■■□□□ 1.12
ACTN1-220ENST00000556433 OOSP2Q86WS3 158 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 ALG3Q92685 438 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 ULK4Q96C45 1275 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 ABHD17AQ96GS6 310 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 LINC00615Q96LM1 132 aaPredicted RBP22.06■■□□□ 1.12
ACTN1-220ENST00000556433 PPP1R2P1Q96PQ5 205 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 CD180Q99467 661 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 TBL1YQ9BQ87 522 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 LACRTQ9GZZ8 138 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 SLC24A2Q9UI40 661 aa22.06■■□□□ 1.12
ACTN1-220ENST00000556433 OR6C74A6NCV1 312 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 AGAP14A8MT82 685 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 SGTAO43765 313 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 EBLN1P0CF75 366 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 KRT33BQ14525 404 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 SKIDA1Q1XH10 827 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 RAD9BQ6WBX8 426 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 CERS6Q6ZMG9 384 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 KMT5CQ86Y97 462 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 LRRC45Q96CN5 670 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 MRFAP1L1Q96HT8 127 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 FCRL4Q96PJ5 515 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 LHX9Q9NQ69 397 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 COLEC10Q9Y6Z7 277 aa22.05■■□□□ 1.12
ACTN1-220ENST00000556433 BSNQ9UPA5 3926 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 TLCD2A6NGC4 264 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 ITGALP20701 1170 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 HADHAP40939 763 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 ZNF140P52738 457 aaPredicted RBP22.04■■□□□ 1.12
ACTN1-220ENST00000556433 HSD11B2P80365 405 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 DNASE1L3Q13609 305 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 CAPRIN2Q6IMN6 1127 aaKnown RBP22.04■■□□□ 1.12
ACTN1-220ENST00000556433 SNX20Q7Z614 316 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 NXPE1Q8N323 547 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 LILRA3Q8N6C8 439 aaPredicted RBP22.04■■□□□ 1.12
ACTN1-220ENST00000556433 CT55Q8WUE5 264 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 HEXDCQ8WVB3 486 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 RMDN2Q96LZ7 410 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 COPS8Q99627 209 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 CCM2Q9BSQ5 444 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 KIR3DX1Q9H7L2 352 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 ARNT2Q9HBZ2 717 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 FGF21Q9NSA1 209 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 FEZ2Q9UHY8 353 aaPredicted RBP22.04■■□□□ 1.12
ACTN1-220ENST00000556433 KCNMB2Q9Y691 235 aa22.04■■□□□ 1.12
ACTN1-220ENST00000556433 ZNF106Q9H2Y7 1883 aaKnown RBP22.04■■□□□ 1.12
ACTN1-220ENST00000556433 PIPSLA2A3N6 862 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 GRID2IPA4D2P6 1211 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 CFAP99D6REC4 459 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 CCL22O00626 93 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 ZNF189O75820 626 aaPredicted RBP22.03■■□□□ 1.12
ACTN1-220ENST00000556433 NTRK1P04629 796 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 PTMAP06454 111 aaKnown RBP22.03■■□□□ 1.12
ACTN1-220ENST00000556433 FURINP09958 794 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 ATP1B2P14415 290 aaPredicted RBP22.03■■□□□ 1.12
ACTN1-220ENST00000556433 D2HGDHQ8N465 521 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 LRRC57Q8N9N7 239 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 ACRBPQ8NEB7 543 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 OR4E2Q8NGC2 313 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 HM13Q8TCT9 377 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 C19orf43Q9BQ61 176 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 TWSG1Q9GZX9 223 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 ANAPC2Q9UJX6 822 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 POLHQ9Y253 713 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 PCDHGA6Q9Y5G7 932 aa22.03■■□□□ 1.12
ACTN1-220ENST00000556433 CDC14CA4D256 554 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 LDB2O43679 373 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 CREG1O75629 220 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 NDUFS1P28331 727 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 MC4RP32245 332 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 ARCN1P48444 511 aaKnown RBP22.02■■□□□ 1.12
ACTN1-220ENST00000556433 PRLHRP49683 370 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 VAV2P52735 878 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 PARP6Q2NL67 630 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 ARHGEF18Q6ZSZ5 1173 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 KIAA1328Q86T90 577 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 RBSNQ9H1K0 784 aa22.02■■□□□ 1.12
ACTN1-220ENST00000556433 AKIRIN1Q9H9L7 192 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms