RNA–Protein interactions for RNA: ENST00000556432.1

ACTN1-219, Transcript of actinin alpha 1, humanhuman

TSL 1 (best)

Gene ACTN1, Length 558 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-219ENST00000556432 NFE2L1Q14494 772 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 HIF1AQ16665 826 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 CYP2A13Q16696 494 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 ATP13A5Q4VNC0 1218 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 CT47A1Q5JQC4 288 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-219ENST00000556432 IRF2BP2Q7Z5L9 587 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 TMC3Q7Z5M5 1100 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 CARFQ8N187 725 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 GRHL3Q8TE85 626 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 N4BP2L2Q92802 583 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-219ENST00000556432 CNDP1Q96KN2 507 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 LURAP1Q96LR2 239 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 C12orf66Q96MD2 445 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 TSGA13Q96PP4 275 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 GBP5Q96PP8 586 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 TRAPPC9Q96Q05 1148 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 VPS35Q96QK1 796 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 DPH2Q9BQC3 489 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-219ENST00000556432 SYT11Q9BT88 431 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 DHRS4Q9BTZ2 278 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 ZBTB20Q9HC78 741 aaPredicted RBP13.55□□□□□ -0.24
ACTN1-219ENST00000556432 MAGEE1Q9HCI5 957 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 FANCLQ9NW38 375 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 SERTAD3Q9UJW9 196 aa13.55□□□□□ -0.24
ACTN1-219ENST00000556432 NOVA2Q9UNW9 492 aaKnown RBP13.55□□□□□ -0.24
ACTN1-219ENST00000556432 SEC16AO15027 2179 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 A0A1B0GUH1 482 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 OR2AG2A6NM03 316 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 E7EQ34 232 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 ZNF749O43361 778 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 EDN3P14138 238 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 MX2P20592 715 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 LMAN1P49257 510 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 CTSCP53634 463 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 SLC25A11Q02978 314 aaKnown RBP13.54□□□□□ -0.24
ACTN1-219ENST00000556432 DMPKQ09013 629 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 CDC16Q13042 620 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 GSE1Q14687 1217 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 SSPNQ14714 243 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 PAFAH1B3Q15102 231 aaKnown RBP13.54□□□□□ -0.24
ACTN1-219ENST00000556432 ASIC2Q16515 512 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 CCDC70Q6NSX1 233 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 SPOCD1Q6ZMY3 1216 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 B4GALNT4Q76KP1 1039 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 GPR135Q8IZ08 494 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 BRSK1Q8TDC3 778 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 FATE1Q969F0 183 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 ZNF830Q96NB3 372 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-219ENST00000556432 ERGIC2Q96RQ1 377 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 INSM2Q96T92 566 aaPredicted RBP13.54□□□□□ -0.24
ACTN1-219ENST00000556432 C17orf62Q9BQA9 187 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 WWP1Q9H0M0 922 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 NUP62CLQ9H1M0 184 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 HAUS4Q9H6D7 363 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 SYTL2Q9HCH5 934 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 P4HTMQ9NXG6 502 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 NDOR1Q9UHB4 597 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 SLC24A2Q9UI40 661 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 POMT2Q9UKY4 750 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 TMPRSS11EQ9UL52 423 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 CSAG2Q9Y5P2 127 aa13.54□□□□□ -0.24
ACTN1-219ENST00000556432 E2F3O00716 465 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 HBQ1P09105 142 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 SLC35G4P0C7Q5 338 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 GZMAP12544 262 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 CDK11BP21127 795 aaKnown RBP13.53□□□□□ -0.24
ACTN1-219ENST00000556432 HADHAP40939 763 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 DPYSL3Q14195 570 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 PPP2R5EQ16537 467 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 ZNF789Q5FWF6 425 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 CCDC183Q5T5S1 534 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 C1orf189Q5VU69 101 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 IRAK1BP1Q5VVH5 260 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 TMEM220Q6QAJ8 160 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 FAM180AQ6UWF9 173 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 ZGRF1Q86YA3 2104 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 PARP9Q8IXQ6 854 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 NXPE1Q8N323 547 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 RASGEF1AQ8N9B8 481 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 KCTD6Q8NC69 237 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 OR4E2Q8NGC2 313 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 DNAJB14Q8TBM8 379 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 BTBD6Q96KE9 485 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 TRIB3Q96RU7 358 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 CEP41Q9BYV8 373 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 KLHL25Q9H0H3 589 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 KIR3DX1Q9H7L2 352 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 CBX8Q9HC52 389 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 ATP13A2Q9NQ11 1180 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 C1GALT1Q9NS00 363 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 CSMD2Q7Z408 3487 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 NF1P21359 2839 aa13.53□□□□□ -0.24
ACTN1-219ENST00000556432 CNTRLQ7Z7A1 2325 aa13.52□□□□□ -0.24
ACTN1-219ENST00000556432 KLF7O75840 302 aaPredicted RBP13.52□□□□□ -0.25
ACTN1-219ENST00000556432 COX6B1P14854 86 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 AKT1P31749 480 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 GBE1Q04446 702 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 SLC9A5Q14940 896 aa13.52□□□□□ -0.25
ACTN1-219ENST00000556432 HADHQ16836 314 aaKnown RBP13.52□□□□□ -0.25
ACTN1-219ENST00000556432 LDLRAP1Q5SW96 308 aa13.52□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms