RNA–Protein interactions for RNA: ENST00000556343.1

ACTN1-218, Transcript of actinin alpha 1, humanhuman

TSL 3

Gene ACTN1, Length 274 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTN1-218ENST00000556343 OR13H1Q8NG92 308 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 PPP1R14CQ8TAE6 165 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 CEP76Q8TAP6 659 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 MCOLN3Q8TDD5 553 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 EEF1AKMT1Q8WVE0 214 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 GLMNQ92990 594 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 KIAA1191Q96A73 305 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 CCDC126Q96EE4 140 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 SLC6A18Q96N87 628 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 FAM111AQ96PZ2 611 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 C1QTNF1Q9BXJ1 281 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 COG4Q9H9E3 785 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 EBF2Q9HAK2 575 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 TM9SF3Q9HD45 589 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 TRNAU1APQ9NX07 287 aaKnown RBP9.05□□□□□ -0.96
ACTN1-218ENST00000556343 FAM53CQ9NYF3 392 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 RNF112Q9ULX5 631 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 CA5BQ9Y2D0 317 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 DGKBQ9Y6T7 804 aa9.05□□□□□ -0.96
ACTN1-218ENST00000556343 A0A1W2PR77 199 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SLC5A10A0PJK1 596 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 FOXO6A8MYZ6 492 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 H0Y8X5 98 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 BTN3A1O00481 513 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 VILLO15195 856 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 POLR3GO15318 223 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 BIRC5O15392 142 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 GALR2O43603 387 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SGTAO43765 313 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 PLIN3O60664 434 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SNX2O60749 519 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 KERAO60938 352 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 LILRB5O75023 590 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 H2AFYO75367 372 aaKnown RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 CATP04040 527 aaKnown RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 MYL2P10916 166 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SLC2A4P14672 509 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 CPA3P15088 417 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 CD1DP15813 335 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 CREB1P16220 341 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 MAOBP27338 520 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 RPA3P35244 121 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 HOXD12P35452 270 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 HALP42357 657 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 CLCNKAP51800 687 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 NAA20P61599 178 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 IRF9Q00978 393 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 TIAL1Q01085 375 aaKnown RBP eCLIP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SP140Q13342 867 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 KRT33BQ14525 404 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 ACSBG2Q5FVE4 666 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 METRNLQ641Q3 311 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 LVRNQ6Q4G3 990 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 TMEM207Q6UWW9 146 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 CHST15Q7LFX5 561 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 GPSM1Q86YR5 675 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 NUDCD3Q8IVD9 361 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SLC22A9Q8IVM8 553 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 ZNF547Q8IVP9 402 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 MAML2Q8IZL2 1156 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SDR16C5Q8N3Y7 309 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 FSTL5Q8N475 847 aaPredicted RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 PHC3Q8NDX5 983 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 ARMC2Q8NEN0 867 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 MGARPQ8TDB4 240 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 ANKRD49Q8WVL7 239 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 NELL1Q92832 810 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 ZC3H10Q96K80 434 aaKnown RBP9.04□□□□□ -0.96
ACTN1-218ENST00000556343 IRF2BPLQ9H1B7 796 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 IGSF5Q9NSI5 407 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 KLC4Q9NSK0 619 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 GALPQ9UBC7 116 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 SPASTQ9UBP0 616 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 MED16Q9Y2X0 877 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 HEBP2Q9Y5Z4 205 aa9.04□□□□□ -0.96
ACTN1-218ENST00000556343 BDP1A6H8Y1 2624 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 HRO43593 1189 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 DFNA5O60443 496 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 WISP3O95389 354 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 SLC35G4P0C7Q5 338 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ACP5P13686 325 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 CHN1P15882 459 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ATP5F1P24539 256 aaPredicted RBP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 GLRBP48167 497 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ATP1A2P50993 1020 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 HK3P52790 923 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 AP1S2P56377 157 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 HNRNPKP61978 463 aaKnown RBP eCLIP9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ABRQ12979 859 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 GBX1Q14549 363 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ELOCQ15369 112 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 DUOXA1Q1HG43 343 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 PLA2G4EQ3MJ16 856 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 CDKL4Q5MAI5 379 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 ATG16L1Q676U5 607 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 C16orf46Q6P387 395 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 IL27RAQ6UWB1 636 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 UNC5DQ6UXZ4 953 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 CYHR1Q6ZMK1 362 aa9.03□□□□□ -0.96
ACTN1-218ENST00000556343 PRR23BQ6ZRT6 265 aa9.03□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 60.6 ms