RNA–Protein interactions for RNA: ENST00000556013.2

PTCSC3-201, Transcript of papillary thyroid carcinoma susceptibility candidate 3, humanhuman

TSL 1 (best) BASIC

Gene PTCSC3, Length 571 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCSC3-201ENST00000556013 LACTB2Q53H82 288 aaPredicted RBP7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 CCDC181Q5TID7 509 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 IZUMO3Q5VZ72 239 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 ARMC6Q6NXE6 501 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 C16orf46Q6P387 395 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 ZNF449Q6P9G9 518 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 FAM151BQ6UXP7 276 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 B4GALNT4Q76KP1 1039 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 SNX20Q7Z614 316 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 DAAM2Q86T65 1068 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 SYVN1Q86TM6 617 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 HPS6Q86YV9 775 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 CCDC50Q8IVM0 306 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 CDKL3Q8IVW4 592 aaPredicted RBP7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 UNC5BQ8IZJ1 945 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 GALNT6Q8NCL4 622 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 OR4K2Q8NGD2 314 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 ACTL9Q8TC94 416 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 HM13Q8TCT9 377 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 COL26A1Q96A83 441 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 DCUN1D1Q96GG9 259 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 SPATA13Q96N96 652 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 PANX2Q96RD6 677 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 COPS8Q99627 209 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 MAP3K3Q99759 626 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 TUBB2BQ9BVA1 445 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 OSBPL8Q9BZF1 889 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 TRIM5Q9C035 493 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 CHRNA10Q9GZZ6 450 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 TFB2MQ9H5Q4 396 aaKnown RBP7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 KIR3DX1Q9H7L2 352 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 VPS37BQ9H9H4 285 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 FGF21Q9NSA1 209 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 SLC24A2Q9UI40 661 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 LNPEPQ9UIQ6 1025 aa7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 FARSAQ9Y285 508 aaKnown RBP7.6□□□□□ -1.19
PTCSC3-201ENST00000556013 IGLV3-16A0A075B6K0 115 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 TRBV5-4A0A0C4DH59 114 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PIPSLA2A3N6 862 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 OR2AG2A6NM03 316 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PJA2O43164 708 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 MAP3K7O43318 606 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 SGTAO43765 313 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 CPNE3O75131 537 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 SLC4A1P02730 911 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 CD63P08962 238 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 HBQ1P09105 142 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 RAB40ALP0C0E4 278 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PRKAR1AP10644 381 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 ITGALP20701 1170 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PTPN4P29074 926 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 STIP1P31948 543 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 CD97P48960 835 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PMS2P54278 862 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 EIF3EP60228 445 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 NFKB2Q00653 900 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 OTUD4Q01804 1114 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 TUBB3Q13509 450 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 SEMA5AQ13591 1074 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 ERV3-1Q14264 604 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PLCL1Q15111 1095 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 UGT8Q16880 541 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 DNTTIP2Q5QJE6 756 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 FNBP1LQ5T0N5 605 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PAPD7Q5XG87 772 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 DENND5AQ6IQ26 1287 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PWWP2BQ6NUJ5 590 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 FAM83HQ6ZRV2 1179 aaPredicted RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 FAM92BQ6ZTR7 304 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PTRH1Q86Y79 214 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 CFAP206Q8IYR0 622 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 NXPE1Q8N323 547 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 TXLNBQ8N3L3 684 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 TEX19Q8NA77 164 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 ACVR1CQ8NER5 493 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 STYXQ8WUJ0 223 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 KRT35Q92764 455 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 ZNF501Q96CX3 271 aaPredicted RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 MRFAP1L1Q96HT8 127 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 C12orf66Q96MD2 445 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 DPH2Q9BQC3 489 aaPredicted RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 HEMGNQ9BXL5 484 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 MVB12BQ9H7P6 319 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 MLXIPLQ9NP71 852 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 IMP3Q9NV31 184 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 ZDHHC3Q9NYG2 299 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 TRIM10Q9UDY6 481 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 PCDHGA9Q9Y5G4 932 aaKnown RBP7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 ARL5AQ9Y689 179 aa7.59□□□□□ -1.19
PTCSC3-201ENST00000556013 SETXQ7Z333 2677 aaKnown RBP7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 CLEC18AA5D8T8 446 aa7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 GOLGA6L9A6NEM1 432 aa7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 ERI2A8K979 691 aaKnown RBP7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 MIF4GDA9UHW6 222 aaKnown RBP7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 F8W8V4 182 aa7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 IFRD1O00458 451 aaPredicted RBP7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 LDB2O43679 373 aa7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 KLHL41O60662 606 aa7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 KATNA1O75449 491 aa7.58□□□□□ -1.2
PTCSC3-201ENST00000556013 RFPL1O75677 317 aa7.58□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms