RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 CSHL1Q14406 222 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 KRT33BQ14525 404 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 ELOCQ15369 112 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 DUOXA1Q1HG43 343 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 IL27RAQ6UWB1 636 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 NEK10Q6ZWH5 1172 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 CPNE9Q8IYJ1 553 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 PHACTR4Q8IZ21 702 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 FSTL5Q8N475 847 aaPredicted RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 AVL9Q8NBF6 648 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 FAM76AQ8TAV0 307 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 RDH11Q8TC12 318 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 MAGEC3Q8TD91 643 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 NELL1Q92832 810 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 TLCD1Q96CP7 247 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 PDXPQ96GD0 296 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 LOXL4Q96JB6 756 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HIST1H2AHQ96KK5 128 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 BMFQ96LC9 184 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HIST1H2AJQ99878 128 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 H2AFJQ9BTM1 129 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 DERL2Q9GZP9 239 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 DPEP2Q9H4A9 486 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 COG4Q9H9E3 785 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 FGF22Q9HCT0 170 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 TRNAU1APQ9NX07 287 aaKnown RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 CAMSAP3Q9P1Y5 1249 aaPredicted RBP11□□□□□ -0.65
SHMT2-220ENST00000555634 SPASTQ9UBP0 616 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 TMCO1Q9UM00 188 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 DNAJC16Q9Y2G8 782 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 HEBP2Q9Y5Z4 205 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 PRSS21Q9Y6M0 314 aa11□□□□□ -0.65
SHMT2-220ENST00000555634 A0A1W2PPM1 405 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 C10orf142B7Z368 130 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 SNX2O60749 519 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 SMIM24O75264 130 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 RFPL1O75677 317 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 CER1O95813 267 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ENO2P09104 434 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-220ENST00000555634 MPC1LP0DKB6 136 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 JUNDP17535 347 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 CRHR1P34998 444 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 NXPH1P58417 271 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 PPP2R2AP63151 447 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 DMPKQ09013 629 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 SRSF5Q13243 272 aaKnown RBP10.99□□□□□ -0.65
SHMT2-220ENST00000555634 BIRC2Q13490 618 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ZNF460Q14592 562 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ACAP2Q15057 778 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ALG11Q2TAA5 492 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 PYCR3Q53H96 274 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 TTMPQ5BVD1 217 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 HHATQ5VTY9 493 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 PAQR3Q6TCH7 311 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 RAB44Q7Z6P3 723 aaPredicted RBP10.99□□□□□ -0.65
SHMT2-220ENST00000555634 TAX1BP1Q86VP1 789 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 GKN2Q86XP6 184 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 CEP97Q8IW35 865 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 TRIM48Q8IWZ4 208 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 CFAP206Q8IYR0 622 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 CYP4X1Q8N118 509 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 SLC22A18ASQ8N1D0 253 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 SDR16C5Q8N3Y7 309 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 MZB1Q8WU39 189 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ZBTB9Q96C00 473 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 CCDC126Q96EE4 140 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 NUSAP1Q9BXS6 441 aaKnown RBP10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ZDHHC5Q9C0B5 715 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 MRPL46Q9H2W6 279 aaKnown RBP10.99□□□□□ -0.65
SHMT2-220ENST00000555634 EBF2Q9HAK2 575 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 GPR27Q9NS67 375 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 KLC4Q9NSK0 619 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 TSR3Q9UJK0 312 aaKnown RBP10.99□□□□□ -0.65
SHMT2-220ENST00000555634 GMEB2Q9UKD1 530 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 PILRBQ9UKJ0 227 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 RNF112Q9ULX5 631 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 PCDHGA5Q9Y5G8 931 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ANKRD12Q6UB98 2062 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 PI4KAP42356 2102 aa10.99□□□□□ -0.65
SHMT2-220ENST00000555634 ZNF318Q5VUA4 2279 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ADAMTS9Q9P2N4 1935 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 TMEM120BA0PK00 339 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 HMX2A2RU54 273 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SUPT3HB4E1H0 165 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 HRO43593 1189 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SPAG7O75391 227 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SUPT3HO75486 399 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SYF2O95926 243 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 NME1P15531 152 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 OAS2P29728 719 aaKnown RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 CCR7P32248 378 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ACTR1BP42025 376 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 GLRBP48167 497 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ATXN3P54252 364 aaPredicted RBP10.98□□□□□ -0.65
SHMT2-220ENST00000555634 ACTR1AP61163 376 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 SLC18A2Q05940 514 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 FZD2Q14332 565 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 INAVAQ3KP66 663 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 LAIR1Q6GTX8 287 aa10.98□□□□□ -0.65
SHMT2-220ENST00000555634 UNC5DQ6UXZ4 953 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms