RNA–Protein interactions for RNA: ENST00000555323.1

SYNE2-219, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 3

Gene SYNE2, Length 389 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-219ENST00000555323 GPR22Q99680 433 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 OR52A5Q9H2C5 316 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 PRDM8Q9NQV8 689 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 TAS2R13Q9NYV9 303 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 GALPQ9UBC7 116 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 DNAJC16Q9Y2G8 782 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 WDR37Q9Y2I8 494 aa12.43□□□□□ -0.42
SYNE2-219ENST00000555323 ZFHX2Q9C0A1 2572 aaPredicted RBP12.43□□□□□ -0.42
SYNE2-219ENST00000555323 TDRD6O60522 2096 aaKnown RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ARID1BQ8NFD5 2236 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 FAM186AA6NE01 2351 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 KIR2DS5A0A0G2JLQ3 304 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 A0A0G2JNG1 304 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 HMX2A2RU54 273 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 E5RI56 91 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 KIR2DS3K7RE56 304 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 EIF3FO00303 357 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 SIGLEC6O43699 453 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 NOBOXO60393 691 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 TCEA3O75764 348 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 FAM155BO75949 473 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 EML2O95834 649 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 APOA4P06727 396 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 NUDT17P0C025 328 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 SLC2A4P14672 509 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 XRCC1P18887 633 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 FDXRP22570 491 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ACADLP28330 430 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 GCAP28676 217 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 PDHA2P29803 388 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ATP5DP30049 168 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 PLA2G5P39877 138 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 CDKN2DP55273 166 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 POU4F1Q01851 419 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 KIR2DS5Q14953 304 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 CLCA4Q14CN2 919 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 RASA2Q15283 850 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 PROX2Q3B8N5 592 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 INAVAQ3KP66 663 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ADGRD1Q6QNK2 874 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 SFRP1Q8N474 314 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 EID2Q8N6I1 236 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ARL10Q8N8L6 244 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ACVR1CQ8NER5 493 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 CD200R1Q8TD46 325 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ZDHHC1Q8WTX9 485 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 UBLCP1Q8WVY7 318 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 INPP5DQ92835 1189 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 TMEM159Q96B96 161 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 FAM122AQ96E09 287 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 APOLD1Q96LR9 279 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 NDNQ99608 321 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 CCDC77Q9BR77 488 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 PPCSQ9HAB8 311 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 NCKIPSDQ9NZQ3 722 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 SCHIP1Q9P0W5 487 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 ZNF624Q9P2J8 865 aaPredicted RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 BTBD3Q9Y2F9 522 aa12.42□□□□□ -0.42
SYNE2-219ENST00000555323 MTO1Q9Y2Z2 717 aaKnown RBP12.42□□□□□ -0.42
SYNE2-219ENST00000555323 TP53BP1Q12888 1972 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 PIKFYVEQ9Y2I7 2098 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 LY6G6EA0A0G2JKS1 128 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 EXOC1LA0A1B0GW35 172 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 FAM95CA0A1B0GW59 222 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 FFAR2O15552 330 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SH3BP5O60239 455 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 VPS26AO75436 327 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 WISP3O95389 354 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 INHBAP08476 426 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 ITGA2BP08514 1039 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 CBSLP0DN79 551 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 ITGB6P18564 788 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 PTPRZ1P23471 2315 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 CNTFP26441 200 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 RPL10P27635 214 aaKnown RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 PBLDP30039 288 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 CBSP35520 551 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SLC19A1P41440 591 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 MSH2P43246 934 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 ABCG1P45844 678 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 FASLGP48023 281 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SERPINB9P50453 376 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 CSRP3P50461 194 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 TAS2R39P59534 338 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 HSPA14Q0VDF9 509 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 TCEA2Q15560 299 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 ZKSCAN8Q15776 578 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 BEND6Q5SZJ8 279 aaPredicted RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 NAPRTQ6XQN6 538 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 CYHR1Q6ZMK1 362 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 NEK10Q6ZWH5 1172 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 NAXDQ8IW45 347 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SLC35F3Q8IY50 421 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 SLC22A15Q8IZD6 547 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 ZBTB2Q8N680 514 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 GPATCH11Q8N954 259 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 AVL9Q8NBF6 648 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 GIMAP7Q8NHV1 300 aa12.41□□□□□ -0.42
SYNE2-219ENST00000555323 UHMK1Q8TAS1 419 aaKnown RBP12.41□□□□□ -0.42
SYNE2-219ENST00000555323 RHBDD1Q8TEB9 315 aa12.41□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 54 ms