RNA–Protein interactions for RNA: ENST00000555178.5

TDP1-211, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5

Gene TDP1, Length 2,200 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-211ENST00000555178 ALG9Q9H6U8 611 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 NMRAL1Q9HBL8 299 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 DCDC2Q9UHG0 476 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 ZNHIT2Q9UHR6 403 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 DMTF1Q9Y222 760 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CDYLQ9Y232 598 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 DNAJC16Q9Y2G8 782 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 DHRS7Q9Y394 339 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 A0A1B0GVT2 93 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PRSS38A1L453 326 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 NPEPPSL1A6NEC2 478 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 NEMP2A6NFY4 417 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 A6NNZ2 444 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 TM9SF1O15321 606 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 POP7O75817 140 aaKnown RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 PYGLP06737 847 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 LTA4HP09960 611 aaKnown RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 DHRS4L1P0CG22 281 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 TFEBP19484 476 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 KCNA4P22459 653 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 AK4P27144 223 aaPredicted RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 AOAHP28039 575 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 TEAD1P28347 426 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 MDH1P40925 334 aaKnown RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 GNPDA1P46926 289 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 SIM2Q14190 667 aaPredicted RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 NFE2L1Q14494 772 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 ZNF528Q3MIS6 628 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 LYSMD4Q5XG99 296 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CEP68Q76N32 757 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CHST15Q7LFX5 561 aaPredicted RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 ARFGAP2Q8N6H7 521 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 SPDYE1Q8NFV5 336 aaPredicted RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 ELMO1Q92556 727 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PIGKQ92643 395 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 KLHDC7BQ96G42 594 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 TMEM168Q9H0V1 697 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 CNOT10Q9H9A5 744 aaKnown RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 POPDC3Q9HBV1 291 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 SPATS2LQ9NUQ6 558 aaKnown RBP10.57□□□□□ -0.72
TDP1-211ENST00000555178 FAM86C1Q9NVL1 165 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PILRBQ9UKJ0 227 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 KCNK6Q9Y257 313 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 ANKRD6Q9Y2G4 727 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 COMMD10Q9Y6G5 202 aa10.57□□□□□ -0.72
TDP1-211ENST00000555178 PRAMEF33A0A0G2JMD5 474 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 SPTY2D1-AS1A0A0U1RR47 76 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 GRID2O43424 1007 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 SERPINB4P48594 390 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 KIAA1024LP59773 190 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 RACK1P63244 317 aaKnown RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 C1orf61Q13536 156 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 PCLAFQ15004 111 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 TSNQ15631 228 aaKnown RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 PYCR3Q53H96 274 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 TECRLQ5HYJ1 363 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 HHATQ5VTY9 493 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 ZCCHC23Q6ZST2 131 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 ISCA2Q86U28 154 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 HID1Q8IV36 788 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 OR56A4Q8NGH8 313 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 ZC3H10Q96K80 434 aaKnown RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 WDR92Q96MX6 357 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 PCED1AQ9H1Q7 454 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 RABEP2Q9H5N1 569 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 CARS2Q9HA77 564 aaKnown RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 TARM1B6A8C7 271 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 G3V2L1 256 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 TLR4O00206 839 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 CACNB4O00305 520 aaPredicted RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 BTN3A1O00481 513 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 BCAT2O15382 392 aaPredicted RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 SNRNP200O75643 2136 aaKnown RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 AP2A2O94973 939 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 GSTA1P08263 222 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 ACP5P13686 325 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 CD9P21926 228 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 SLC18A1P54219 525 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 GNGT1P63211 74 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 SEPT7Q16181 437 aaKnown RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 FAM83EQ2M2I3 478 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 FBXO48Q5FWF7 155 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 TCEAL6Q6IPX3 200 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 NRROSQ86YC3 692 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 LMNTD1Q8N9Z9 388 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 DYDC1Q8WWB3 177 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 INPP5DQ92835 1189 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 TCEAL3Q969E4 200 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 SCARF2Q96GP6 870 aaPredicted RBP10.56□□□□□ -0.72
TDP1-211ENST00000555178 KCTD5Q9NXV2 234 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 CIDEBQ9UHD4 219 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 ADAMTS6Q9UKP5 1117 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 PSMD13Q9UNM6 376 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 GPSM3Q9Y4H4 160 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 SNX11Q9Y5W9 270 aa10.56□□□□□ -0.72
TDP1-211ENST00000555178 DMXL1Q9Y485 3027 aa10.55□□□□□ -0.72
TDP1-211ENST00000555178 VEGFDO43915 354 aa10.55□□□□□ -0.72
TDP1-211ENST00000555178 BGNP21810 368 aa10.55□□□□□ -0.72
TDP1-211ENST00000555178 RPL10P27635 214 aaKnown RBP10.55□□□□□ -0.72
TDP1-211ENST00000555178 RABIFP47224 123 aa10.55□□□□□ -0.72
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms