RNA–Protein interactions for RNA: ENST00000554831.1

KTN1-217, Transcript of kinectin 1, humanhuman

TSL 1 (best)

Gene KTN1, Length 6,241 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KTN1-217ENST00000554831 BTAF1O14981 1849 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 LOC100506127A0A0U1RQW1 187 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 C7orf72A4D263 438 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 BCKDKO14874 412 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TRIM24O15164 1050 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 NDUFS2O75306 463 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 UGT2B11O75310 529 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CLPXO76031 633 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CLDN9O95484 217 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 PRAMEF1O95521 474 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 COX7A2P14406 83 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 RPL3P39023 403 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 CCR3P51677 355 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CLCN4P51793 760 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TMBIM6P55061 237 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 UFM1P61960 85 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CDKL1Q00532 357 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SRSF11Q05519 484 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 PPP1R8Q12972 351 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 CBX3Q13185 183 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 PWP1Q13610 501 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 GRB7Q14451 532 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 RETREG3Q86VR2 466 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ADGRG5Q8IZF4 528 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 LSMEM2Q8N112 164 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CLDN19Q8N6F1 224 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ZNF557Q8N988 423 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 HJURPQ8NCD3 748 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 UPF1Q92900 1129 aaKnown RBP eCLIP3.84□□□□□ -1.79
KTN1-217ENST00000554831 ISOC1Q96CN7 298 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 L3HYPDHQ96EM0 354 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TTPALQ9BTX7 342 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 NMUR1Q9HB89 426 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TREX1Q9NSU2 369 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 DNAAF2Q9NVR5 837 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 TMEM248Q9NWD8 314 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TMEM181Q9P2C4 612 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ZNF490Q9ULM2 529 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 SLC45A1Q9Y2W3 748 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 EFCAB10A6NFE3 127 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 GRXCR2A6NFK2 248 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 GLTPD2A6NH11 291 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SAGE2PA6NJ88 616 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 J3QRK9 145 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CXCR6O00574 342 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SLC22A1O15245 554 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SUV39H1O43463 412 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 PRAMEF11O60813 436 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 MFN2O95140 757 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SNAP29O95721 258 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 URODP06132 367 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ASGR1P07306 291 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 NR4A1P22736 598 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ARRB2P32121 409 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ACVRL1P37023 503 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 NSG1P42857 185 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 MAGEA11P43364 429 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 EPHB3P54753 998 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 PURAQ00577 322 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 HMGCS1Q01581 520 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 CACNG1Q06432 222 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 GPR17Q13304 367 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 RCAN2Q14206 197 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 XKR4Q5GH76 650 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ARMCX4Q5H9R4 360 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 MS4A13Q5J8X5 152 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 MARCH8Q5T0T0 291 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 DENND5AQ6IQ26 1287 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 USP45Q70EL2 814 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 GPRIN1Q7Z2K8 1008 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SLC44A2Q8IWA5 706 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 ZZZ3Q8IYH5 903 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 SCML4Q8N228 414 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ELMOD1Q8N336 334 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TMEM130Q8N3G9 435 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TCAIMQ8N3R3 496 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TMEM102Q8N9M5 508 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 KLHL23Q8NBE8 558 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 OR5K1Q8NHB7 308 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ASZ1Q8WWH4 475 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 HDAC2Q92769 488 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 PROX1Q92786 737 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 MYDGFQ969H8 173 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ITFG2Q969R8 447 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 FBXL8Q96CD0 374 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 KLHL32Q96NJ5 620 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ZNF347Q96SE7 839 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 C6orf62Q9GZU0 229 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 NSUN3Q9H649 340 aaKnown RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 RETREG1Q9H6L5 497 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 TRIM45Q9H8W5 580 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 MIEF1Q9NQG6 463 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 DYRK4Q9NR20 520 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 ABCB10Q9NRK6 738 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 KLHL3Q9UH77 587 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP3.84□□□□□ -1.79
KTN1-217ENST00000554831 PHF24Q9UPV7 400 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 GPC6Q9Y625 555 aaPredicted RBP3.84□□□□□ -1.79
KTN1-217ENST00000554831 A0A1W2PQ67 120 aa3.84□□□□□ -1.79
KTN1-217ENST00000554831 NPEPPSL1A6NEC2 478 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms