RNA–Protein interactions for RNA: ENST00000554776.5

SCFD1-213, Transcript of sec1 family domain containing 1, humanhuman

TSL 5

Gene SCFD1, Length 583 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-213ENST00000554776 TMEM173Q86WV6 379 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 PM20D2Q8IYS1 436 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 AFAP1Q8N556 730 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 NKAIN3Q8N8D7 197 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF441Q8N8Z8 693 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SLC38A9Q8NBW4 561 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 OR2AJ1Q8NGZ0 328 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 OR52I2Q8NH67 350 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 GOT1L1Q8NHS2 421 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 KIF18AQ8NI77 898 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 MAGEC3Q8TD91 643 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SLC20A1Q8WUM9 679 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 ATP6V1E2Q96A05 226 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SPACA9Q96E40 222 aaPredicted RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TMEM19Q96HH6 336 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SPATA17Q96L03 361 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 FAM81BQ96LP2 452 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 ZNF558Q96NG5 402 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 DACH2Q96NX9 599 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 IL17FQ96PD4 163 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 DESI2Q9BSY9 194 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 CSTL1Q9H114 145 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SLA2Q9H6Q3 261 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 LRRC4Q9HBW1 653 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 OSER1Q9NX31 292 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 CHCHD3Q9NX63 227 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 TRMT1Q9NXH9 659 aaKnown RBP3.01□□□□□ -1.93
SCFD1-213ENST00000554776 RHCGQ9UBD6 479 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 MALT1Q9UDY8 824 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 OSGIN1Q9UJX0 560 aa3.01□□□□□ -1.93
SCFD1-213ENST00000554776 SCN5AQ14524 2016 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 NOTCH4Q99466 2003 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 SOS1Q07889 1333 aaPredicted RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 PRSS51A0A1B0GVH4 220 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 A0A1W2PP11 408 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 A0A1W2PPM1 405 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 OR2M5A3KFT3 312 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 SSX4O60224 188 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 PRAMEF11O60813 436 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 LDB3O75112 727 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 KRT19P08727 400 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 QDPRP09417 244 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 CCDC175P0C221 793 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 ITGA2P17301 1181 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 CYP11B2P19099 503 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 PTAFRP25105 342 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 TLX1P31314 330 aaPredicted RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 PRKCIP41743 596 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 AMPHP49418 695 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 POU3F1Q03052 451 aaPredicted RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 SLC20A2Q08357 652 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 ZBTB17Q13105 803 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 PRKAA1Q13131 559 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 RNASEH2BQ5TBB1 312 aaKnown RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 CST9LP1Q5W188 147 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 WBP2NLQ6ICG8 309 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 DCLRE1AQ6PJP8 1040 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 GFRALQ6UXV0 394 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 PPP1R21Q6ZMI0 780 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 CHST3Q7LGC8 479 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 CCDC186Q7Z3E2 898 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 CUZD1Q86UP6 607 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 NR2C2APQ86WQ0 139 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 TMPRSS12Q86WS5 348 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 THNSL1Q8IYQ7 743 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 C1orf87Q8N0U7 546 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 C1orf52Q8N6N3 182 aaKnown RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 XXYLT1Q8NBI6 393 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 CAMKVQ8NCB2 501 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 TSPAN14Q8NG11 270 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 OR10S1Q8NGN2 331 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 SORCS1Q8WY21 1168 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 ABTB1Q969K4 478 aaPredicted RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 PIGTQ969N2 578 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 HDAC11Q96DB2 347 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 QRFPRQ96P65 431 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 GBP5Q96PP8 586 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 OR6C1Q96RD1 312 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 PKP4Q99569 1192 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 ADPGKQ9BRR6 497 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 ABHD6Q9BV23 337 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 FNDC11Q9BVV2 318 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 NUP85Q9BW27 656 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 LRMDAQ9H2I8 198 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 TMEM30AQ9NV96 361 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 PRMT7Q9NVM4 692 aaPredicted RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 RCC2Q9P258 522 aaKnown RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 DDX25Q9UHL0 483 aaKnown RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 SLC24A2Q9UI40 661 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 TUBE1Q9UJT0 475 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 RNF150Q9ULK6 438 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 OR2W1Q9Y3N9 320 aa3□□□□□ -1.93
SCFD1-213ENST00000554776 TMEM184BQ9Y519 407 aaPredicted RBP3□□□□□ -1.93
SCFD1-213ENST00000554776 CGNL1Q0VF96 1302 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 IGHV4OR15-8A0A075B7B6 117 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 SAA2-SAA4A0A096LPE2 208 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 A0A0G2JPF8 293 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 FEZF1A0PJY2 475 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 ANKUB1A6NFN9 424 aa2.99□□□□□ -1.93
SCFD1-213ENST00000554776 HNRNPCL2B2RXH8 293 aa2.99□□□□□ -1.93
Retrieved 100 of 20,778 RNA–protein pairs in 37.9 ms