RNA–Protein interactions for RNA: ENST00000554656.5

SHMT2-215, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 817 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-215ENST00000554656 CD68P34810 354 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 CCR10P46092 362 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 EIF3EP60228 445 aaKnown RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 PPP1CAP62136 330 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 CDK18Q07002 472 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 CALCOCO2Q13137 446 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 SNX1Q13596 522 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 PRKD1Q15139 912 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 LLGL1Q15334 1064 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 SLC14A2Q15849 920 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 INSCQ1MX18 579 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 ATP13A5Q4VNC0 1218 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 COLEC12Q5KU26 742 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 PDPK2PQ6A1A2 396 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 KDELC1Q6UW63 502 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 CEP128Q6ZU80 1094 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 HDXQ7Z353 690 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 LRRTM4Q86VH4 590 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 PLXDC1Q8IUK5 500 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 CDKL3Q8IVW4 592 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 TTC30BQ8N4P2 665 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 STARD8Q92502 1023 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 LRRC45Q96CN5 670 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 SNF8Q96H20 258 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 CATSPER2Q96P56 530 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 TGM7Q96PF1 710 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 ZPBPQ9BS86 351 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 TIMM29Q9BSF4 260 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 ACBD3Q9H3P7 528 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 GLOD4Q9HC38 313 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 BPIFA1Q9NP55 256 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 UBP1Q9NZI7 540 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 SAE1Q9UBE0 346 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 MTRF1LQ9UGC7 380 aaKnown RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 NFU1Q9UMS0 254 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 WDR37Q9Y2I8 494 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 RPS6KL1Q9Y6S9 549 aa10.38□□□□□ -0.75
SHMT2-215ENST00000554656 USP9XQ93008 2570 aaPredicted RBP10.38□□□□□ -0.75
SHMT2-215ENST00000554656 PDZK1P1A8MUH7 402 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GPR89AB7ZAQ6 455 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 K7EM74 188 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GAPDHSO14556 408 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 MAP2K7O14733 419 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 CAPN5O15484 640 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 PMPCBO75439 489 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GPR89BP0CG08 455 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 PECAM1P16284 738 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 NR1D1P20393 614 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 IVDP26440 423 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ECHS1P30084 290 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 CHRNA4P43681 627 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 CAPZBP47756 277 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 SEPHS1P49903 392 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 DYNLT1P63172 113 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 MRPS25P82663 173 aaKnown RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 WASHC5Q12768 1159 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 MAP7Q14244 749 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GPR18Q14330 331 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 PDK1Q15118 436 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 DEFB109BQ30KR1 87 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ABRAXAS1Q6UWZ7 409 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GSTA5Q7RTV2 222 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 PCGF5Q86SE9 256 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 AVL9Q8NBF6 648 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GALNT6Q8NCL4 622 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GPR150Q8NGU9 434 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 IFT81Q8WYA0 676 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 KIAA1143Q96AT1 154 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 VPS35Q96QK1 796 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 FMO2Q99518 471 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 FERMT1Q9BQL6 677 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 FUT8Q9BYC5 575 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GPR63Q9BZJ6 419 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ULBP3Q9BZM4 244 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 PHACTR1Q9C0D0 580 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ZNF768Q9H5H4 540 aaKnown RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 SLC40A1Q9NP59 571 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ZNF71Q9NQZ8 489 aaPredicted RBP10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ZDHHC18Q9NUE0 388 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 GRHL1Q9NZI5 618 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 ASIC3Q9UHC3 531 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 MED13Q9UHV7 2174 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 CROTQ9UKG9 612 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 SPTBP11277 2137 aa10.37□□□□□ -0.75
SHMT2-215ENST00000554656 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 ESYT3A0FGR9 886 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 F5H423 210 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 DNALI1O14645 258 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 PPP1R12AO14974 1030 aaPredicted RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 VEGFDO43915 354 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 KIAA0754O94854 1291 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 CDK14O94921 469 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 SEC31AO94979 1220 aaKnown RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 TIAF1O95411 115 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 VIPP01282 170 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 NFKB1P19838 968 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 RPL21P46778 160 aaKnown RBP10.36□□□□□ -0.75
SHMT2-215ENST00000554656 CTSCP53634 463 aa10.36□□□□□ -0.75
SHMT2-215ENST00000554656 WNT3AP56704 352 aa10.36□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms