RNA–Protein interactions for RNA: ENST00000553868.1

SHMT2-208, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 941 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-208ENST00000553868 PIANPQ8IYJ0 282 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 NXPE1Q8N323 547 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 EID2Q8N6I1 236 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 KCNE4Q8WWG9 221 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 LPGAT1Q92604 370 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 DTD2Q96FN9 168 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 AARSD1Q9BTE6 412 aaKnown RBP14.27□□□□□ -0.13
SHMT2-208ENST00000553868 CLPBQ9H078 707 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 FAM96AQ9H5X1 160 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 POPDC3Q9HBV1 291 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 PCMTD2Q9NV79 361 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 SMOXQ9NWM0 555 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 ZDHHC3Q9NYG2 299 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 CLCA2Q9UQC9 943 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 CRYL1Q9Y2S2 319 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 VWA7Q9Y334 891 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 CKAP5Q14008 2032 aa14.27□□□□□ -0.13
SHMT2-208ENST00000553868 A0A096LPK6 155 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 AGAP14A8MT82 685 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 FOXO6A8MYZ6 492 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 CFAP99D6REC4 459 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 SPINT1O43278 529 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 TYROBPO43914 113 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 SPAG7O75391 227 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 PCDH8O95206 1070 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 RALBP11234 206 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 PKMP14618 531 aaKnown RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 SAT1P21673 171 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 RPS3P23396 243 aaKnown RBP eCLIP14.26□□□□□ -0.133e-9■■□□□ 14
SHMT2-208ENST00000553868 ACRV1P26436 265 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 CRHR1P34998 444 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 ETV3P41162 512 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 ATP1A2P50993 1020 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 KPNA2P52292 529 aaKnown RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 DBN1Q16643 649 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 INSCQ1MX18 579 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 SETMARQ53H47 684 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 ZNF789Q5FWF6 425 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 HENMT1Q5T8I9 393 aaKnown RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 HECTD2Q5U5R9 776 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 KIAA1161Q6NSJ0 714 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 UGT3A1Q6NUS8 523 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 NEK5Q6P3R8 708 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 SNRNP27Q8WVK2 155 aaKnown RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 FAM131CQ96AQ9 280 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 AP2M1Q96CW1 435 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 NUS1Q96E22 293 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 KLF6Q99612 283 aaPredicted RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 COPS8Q99627 209 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 C1QTNF7Q9BXJ2 289 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 VPS11Q9H270 941 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 KDM4CQ9H3R0 1056 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 PREBQ9HCU5 417 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 INTS9Q9NV88 658 aaKnown RBP14.26□□□□□ -0.13
SHMT2-208ENST00000553868 TAS2R13Q9NYV9 303 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 GNPTGQ9UJJ9 305 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 GRID1Q9ULK0 1009 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 ACOT9Q9Y305 439 aa14.26□□□□□ -0.13
SHMT2-208ENST00000553868 A0A1B0GTQ1 180 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 PLRG1O43660 514 aaKnown RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 MMP20O60882 483 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 VPS26AO75436 327 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 TM7SF2O76062 418 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 RECQL5O94762 991 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 C2P06681 752 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 CREB1P16220 341 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 UGT1A6P19224 532 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 CD9P21926 228 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 UGT1A1P22309 533 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 UGT1A4P22310 534 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 OXTRP30559 389 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 UGT1A3P35503 534 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 UGT1A5P35504 534 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 SLC26A3P40879 764 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 TAS2R39P59534 338 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 INSM1Q01101 510 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 DPTQ07507 201 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 PDE1CQ14123 709 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 SHBQ15464 509 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 ZKSCAN8Q15776 578 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 ATP13A5Q4VNC0 1218 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 LDLRAP1Q5SW96 308 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 HHATQ5VTY9 493 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 PTRHD1Q6GMV3 140 aaKnown RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 ATG14Q6ZNE5 492 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 SH2D5Q6ZV89 423 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 CMC1Q7Z7K0 106 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 TBC1D1Q86TI0 1168 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 DCBLD1Q8N8Z6 715 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 ANKRD42Q8N9B4 389 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 DYDC1Q8WWB3 177 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 DCUN1D1Q96GG9 259 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 VPS35Q96QK1 796 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 NDNQ99608 321 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 RIOK2Q9BVS4 552 aaKnown RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 SLC13A1Q9BZW2 595 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 ABCG8Q9H221 673 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 CAB39LQ9H9S4 337 aa14.25□□□□□ -0.13
SHMT2-208ENST00000553868 CAMSAP3Q9P1Y5 1249 aaPredicted RBP14.25□□□□□ -0.13
SHMT2-208ENST00000553868 CD84Q9UIB8 345 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.9 ms