RNA–Protein interactions for RNA: ENST00000553308.1

SYNE2-209, Transcript of spectrin repeat containing nuclear envelope protein 2, humanhuman

TSL 4

Gene SYNE2, Length 557 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE2-209ENST00000553308 UGT1A10Q9HAW8 530 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 UGT1A8Q9HAW9 530 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 FANCEQ9HB96 536 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 FAM8A1Q9UBU6 413 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 SLC24A2Q9UI40 661 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 POMT2Q9UKY4 750 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 SRPK3Q9UPE1 567 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 B3GNT3Q9Y2A9 372 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 NTNG1Q9Y2I2 539 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 HEY1Q9Y5J3 304 aa8.84□□□□□ -0.99
SYNE2-209ENST00000553308 TEP1Q99973 2627 aaKnown RBP8.84□□□□□ -1
SYNE2-209ENST00000553308 MASP2O00187 686 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 GAPDHSO14556 408 aaPredicted RBP8.83□□□□□ -1
SYNE2-209ENST00000553308 BUD23O43709 281 aaKnown RBP8.83□□□□□ -1
SYNE2-209ENST00000553308 PROSCO94903 275 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 ATXN8OSP0DMR3 200 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 PRF1P14222 555 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 HLA-DPA1P20036 260 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 CYP2A7P20853 494 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 CDH3P22223 829 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 KDELR1P24390 212 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 HMGCLP35914 325 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 SPAM1P38567 509 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 CHRNA4P43681 627 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 LMAN1P49257 510 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 ELOAQ14241 798 aaKnown RBP8.83□□□□□ -1
SYNE2-209ENST00000553308 SLC14A2Q15849 920 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 PPP2R5EQ16537 467 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 CRB2Q5IJ48 1285 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 LDLRAP1Q5SW96 308 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 FNBP1LQ5T0N5 605 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 METRNLQ641Q3 311 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 CCDC70Q6NSX1 233 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 DET1Q7L5Y6 550 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 RAB43Q86YS6 212 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 CARFQ8N187 725 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 OR4E2Q8NGC2 313 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 RMDN2Q96LZ7 410 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 NAP1L5Q96NT1 182 aaPredicted RBP8.83□□□□□ -1
SYNE2-209ENST00000553308 OLFM3Q96PB7 478 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 NRTNQ99748 197 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 XPO4Q9C0E2 1151 aaKnown RBP8.83□□□□□ -1
SYNE2-209ENST00000553308 ILKAPQ9H0C8 392 aaPredicted RBP8.83□□□□□ -1
SYNE2-209ENST00000553308 KLHL25Q9H0H3 589 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 GLOD4Q9HC38 313 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 C5AR2Q9P296 337 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 SPTBP11277 2137 aa8.83□□□□□ -1
SYNE2-209ENST00000553308 A0A0A6YYK5 440 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 GLYATL1P3A0A0U1RQE8 302 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 A0A1B0GTH6 734 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 GSAPA4D1B5 854 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 LRRD1A4D1F6 860 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 C9J4A7 227 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 LDB2O43679 373 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 KLF7O75840 302 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 SLC35G4P0C7Q5 338 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PVRP15151 417 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 ST6GAL1P15907 406 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 ELAVL4P26378 380 aaKnown RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 AKT1P31749 480 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PREPP48147 710 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 FOXL2P58012 376 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 TYRO3Q06418 890 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PRKAA1Q13131 559 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 MYBPC3Q14896 1274 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PDK1Q15118 436 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 LLGL1Q15334 1064 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 NFKBIBQ15653 356 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 FILIP1LQ4L180 1135 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 LYPLAL1Q5VWZ2 237 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 ZNF385CQ66K41 422 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 SLC9A4Q6AI14 798 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 ALKBH5Q6P6C2 394 aaKnown RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 KDELC1Q6UW63 502 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 SPOCD1Q6ZMY3 1216 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 CUZD1Q86UP6 607 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 TMEM151BQ8IW70 566 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 SLC25A41Q8N5S1 370 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 LILRA3Q8N6C8 439 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 TRAF3IP1Q8TDR0 691 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 UBE2Q2Q8WVN8 375 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 MARVELD3Q96A59 401 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PHF12Q96QT6 1004 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 SRPK1Q96SB4 655 aaKnown RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 BARD1Q99728 777 aaKnown RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 SLC7A5P2Q9GIP4 190 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 ZNF552Q9H707 407 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 ZBTB20Q9HC78 741 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 C1GALT1Q9NS00 363 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 IL17CQ9P0M4 197 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 CTTNBP2NLQ9P2B4 639 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PADI2Q9Y2J8 665 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 PCDHGA10Q9Y5H3 936 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 COPG1Q9Y678 874 aaKnown RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 DNMT3AQ9Y6K1 912 aaPredicted RBP8.82□□□□□ -1
SYNE2-209ENST00000553308 PIKFYVEQ9Y2I7 2098 aa8.82□□□□□ -1
SYNE2-209ENST00000553308 FER1L5A0AVI2 2057 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 LOC285095A0A1B0GVY8 99 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 ARHGAP10A1A4S6 786 aa8.81□□□□□ -1
SYNE2-209ENST00000553308 MGAT4DA6NG13 374 aa8.81□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 70.7 ms