RNA–Protein interactions for RNA: ENST00000552948.5

PPFIA2-227, Transcript of PTPRF interacting protein alpha 2, humanhuman

TSL 1 (best) BASIC

Gene PPFIA2, Length 3,976 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA2-227ENST00000552948 PARVBQ9HBI1 364 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 PCNTO95613 3336 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 EFCAB9A8MZ26 197 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC22A1O15245 554 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 BMP4P12644 408 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 DEFA1P59665 94 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 DEFA3P59666 94 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 CDC42EP1Q00587 391 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 BEX3Q00994 111 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 EMX1Q04741 257 aaPredicted RBP11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 RAPSNQ13702 412 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 GTDC1Q4AE62 458 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 PM20D1Q6GTS8 502 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 PLEKHG7Q6ZR37 379 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 GPRC5AQ8NFJ5 357 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 BBS2Q9BXC9 721 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 TFB2MQ9H5Q4 396 aaKnown RBP11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 SCHIP1Q9P0W5 487 aaPredicted RBP11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 ENPP5Q9UJA9 477 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 HS3ST4Q9Y661 456 aa11.43□□□□□ -0.58
PPFIA2-227ENST00000552948 LRRC37AA6NMS7 1700 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 C2orf81A6NN90 581 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SOBPA7XYQ1 873 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 RGS10O43665 173 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 IDH3BO43837 385 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 TLR5O60602 858 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 KERAO60938 352 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 EEDO75530 441 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 TBX18O95935 607 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 CHRNA1P02708 482 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 MT-ND2P03891 347 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 TGFBR1P36897 503 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 EMX2Q04743 252 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 OXA1LQ15070 435 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 INAVAQ3KP66 663 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SVOPQ8N4V2 548 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 UTP15Q8TED0 518 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC13A3Q8WWT9 602 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 DMRTB1Q96MA1 342 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 TSSK3Q96PN8 268 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 APOL4Q9BPW4 351 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 MROQ9BYG7 248 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 VPS4AQ9UN37 437 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 PTCH2Q9Y6C5 1203 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 ANKRD31Q8N7Z5 1873 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC12A8A0AV02 714 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SH3BGRLO75368 114 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 CYP7B1O75881 506 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 MMP3P08254 477 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 FGF4P08620 206 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 IL12AP29459 219 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 HSPA7P48741 367 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 MTA1Q13330 715 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SMN1Q16637 294 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 DDR2Q16832 855 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 C18orf21Q32NC0 220 aaPredicted RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 TIGD5Q53EQ6 642 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 ALFQ53S48 1182 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 ZNF549Q6P9A3 640 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 GALNT10Q86SR1 603 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 EEF1AKMT1Q8WVE0 214 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SLC10A4Q96EP9 437 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 AARSD1Q9BTE6 412 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 DCSTAMPQ9H295 470 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 VAPAQ9P0L0 249 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SAMHD1Q9Y3Z3 626 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 A0A0U1RQS6 177 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 EVPLLA8MZ36 301 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 NFKBIEO00221 500 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 BNIP3LO60238 219 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 CYP11A1P05108 521 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SMPD1P17405 629 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 CPSF6Q16630 551 aaKnown RBP eCLIP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 CTU2Q2VPK5 515 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SPANXN4Q5MJ08 99 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 BRMS1LQ5PSV4 323 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 MARCH8Q5T0T0 291 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 XAF1Q6GPH4 301 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 NKAPQ8N5F7 415 aaKnown RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 GOLM1Q8NBJ4 401 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 CDKN2AIPNLQ96HQ2 116 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SMIM14Q96QK8 99 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 DOK1Q99704 481 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 SH3GL1Q99961 368 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 ZYG11BQ9C0D3 744 aa11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 PDP1Q9P0J1 537 aaPredicted RBP11.42□□□□□ -0.58
PPFIA2-227ENST00000552948 UBR3Q6ZT12 1888 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 A8MV72 311 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 TFECO14948 347 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 AIREO43918 545 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 CPSF4O95639 269 aaKnown RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 CPNE6O95741 557 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 EFNA1P20827 205 aaPredicted RBP11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ADRA1AP35348 466 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 GDF5P43026 501 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 ZDHHC21Q8IVQ6 265 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 TMEM86AQ8N2M4 240 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 PROKR1Q8TCW9 393 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 FAR1Q8WVX9 515 aa11.41□□□□□ -0.58
PPFIA2-227ENST00000552948 BHMTQ93088 406 aa11.41□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms