RNA–Protein interactions for RNA: ENST00000552480.1

CACNB3-223, Transcript of calcium voltage-gated channel auxiliary subunit beta 3, human

TSL 3

Gene CACNB3, Length 927 nt, Biotype retained intron, Subcellular localisation Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
CACNB3-223	ENST00000552480	LENG8	Q96PV6	779 aa	Predicted RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	UTP6	Q9NYH9	597 aa	Known RBP	12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	ATXN10	Q9UBB4	475 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	PCTP	Q9UKL6	214 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	SLC12A4	Q9UP95	1085 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	GPR34	Q9UPC5	381 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	CDYL	Q9Y232	598 aa		12.46	□□□□□ -0.41
CACNB3-223	ENST00000552480	REV3L	O60673	3130 aa		12.46	□□□□□ -0.42
CACNB3-223	ENST00000552480		A0A1W2PQU0	124 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SLC5A10	A0PJK1	596 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	TRPC5OS	A6NMA1	111 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	FCHO1	O14526	889 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	UBFD1	O14562	309 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	LIN7A	O14910	233 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	DIAPH2	O60879	1101 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	MLYCD	O95822	493 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SERPINA6	P08185	405 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	ACADM	P11310	421 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	IL9	P15248	144 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	MAPK9	P45984	424 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	AGTR2	P50052	363 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	CDK3	Q00526	305 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	CLC	Q05315	142 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	BNIP1	Q12981	228 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	LCP2	Q13094	533 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SGCG	Q13326	291 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	FGL2	Q14314	439 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	IRF4	Q15306	451 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	PHKG1	Q16816	387 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SPRED3	Q2MJR0	410 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	MAP7D1	Q3KQU3	841 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SLC9B1	Q4ZJI4	515 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	VWA5B1	Q5TIE3	1220 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SULT1C3	Q6IMI6	304 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	METTL2B	Q6P1Q9	378 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	KIAA1324	Q6UXG2	1013 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	TMEM92	Q6UXU6	159 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	ZNF852	Q6ZMS4	543 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	UBE2R2	Q712K3	238 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	HEATR4	Q86WZ0	1026 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	HORMAD1	Q86X24	394 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	RASGRP3	Q8IV61	690 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	VRK3	Q8IV63	474 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	OR56A4	Q8NGH8	313 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	MAPK15	Q8TD08	544 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	ASB11	Q8WXH4	323 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	ASB12	Q8WXK4	309 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	TMEM159	Q96B96	161 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	MRGPRX1	Q96LB2	322 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	LINC00615	Q96LM1	132 aa	Predicted RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	NSUN5	Q96P11	429 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	EGFL8	Q99944	293 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	C1QTNF7	Q9BXJ2	289 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	SLC12A9	Q9BXP2	914 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	TEX101	Q9BY14	249 aa		12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	PTBP2	Q9UKA9	531 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	NDRG2	Q9UN36	371 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	RRP15	Q9Y3B9	282 aa	Known RBP	12.45	□□□□□ -0.42
CACNB3-223	ENST00000552480	C17orf113	A0A1B0GUU1	675 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TCRBV21S2A2	A0A5A6	115 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	PABPN1L	A6NDY0	278 aa	Known RBP	12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TMEM202	A6NGA9	273 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TMEM233	B4DJY2	109 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	GFY	I3L273	518 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	E2F3	O00716	465 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	ATP5H	O75947	161 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	FGF4	P08620	206 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	ZNF8	P17098	575 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TSPAN8	P19075	237 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	NDUFV2	P19404	249 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	CYP2A7	P20853	494 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	CD72	P21854	359 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	PBLD	P30039	288 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	SCTR	P47872	440 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	CCR3	P51677	355 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	CDH13	P55290	713 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	PRKCQ	Q04759	706 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	PDCD2	Q16342	344 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	ACAD11	Q709F0	780 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TRAPPC5	Q8IUR0	188 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	SLC22A15	Q8IZD6	547 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TCAIM	Q8N3R3	496 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	SYNPO	Q8N3V7	929 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	DEFB123	Q8N688	67 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TRPC4AP	Q8TEL6	797 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	AGAP11	Q8TF27	550 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	SKA2	Q8WVK7	121 aa	Predicted RBP	12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	DLG3	Q92796	817 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	RHBDF1	Q96CC6	855 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	CCDC28B	Q9BUN5	200 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	SLC17A9	Q9BYT1	436 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TRIM54	Q9BYV2	358 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	NUF2	Q9BZD4	464 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	OSBPL6	Q9BZF3	934 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	NMUR2	Q9GZQ4	415 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	PARVB	Q9HBI1	364 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TNFRSF12A	Q9NP84	129 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	MID1IP1	Q9NPA3	183 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	TCF7L2	Q9NQB0	619 aa		12.44	□□□□□ -0.42
CACNB3-223	ENST00000552480	SAR1A	Q9NR31	198 aa		12.44	□□□□□ -0.42

Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms